clusterfly: Explore clustering interactively using R and GGobi
Version 0.4

Visualise clustering algorithms with GGobi. Contains both general code for visualising clustering results and specific visualisations for model-based, hierarchical and SOM clustering.

AuthorHadley Wickham <h.wickham@gmail.com>
Date of publication2014-04-24 07:43:09
MaintainerHadley Wickham <h.wickham@gmail.com>
LicenseMIT + file LICENSE
Version0.4
URL http://had.co.nz/clusterfly
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("clusterfly")

Popular man pages

addhull: Add convex hulls Add conver hulls using the tool qconvex
cfly_cluster: Add clustering.
clusterfly: Creates a convenient data structure for dealing with a...
hierarchical: Hierachical clustering Convenient methods for hierachical...
hierfly: Visualisig hierarchical clustering. This method supplements a...
mefly: Display model based clustering with mvn ellipses. Displays...
olive_example: Example clusterfly object created with olives data
See all...

All man pages Function index File listing

Man pages

addhull: Add convex hulls Add conver hulls using the tool qconvex
as.data.frame.clusterfly: Convert clusterfly object to data.frame. Concatenates data...
cfly_animate: Dynamic plot: Animate glyph colours
cfly_clarify: Match all cluster indices to common reference.
cfly_cluster: Add clustering.
cfly_dist: Static plot: Variable distribution. Draw a density plot for...
cfly_fluct: Static plot: Fluctuation diagram. Draw a fluctuation diagram...
cfly_pcp: Static plot: Parallel coordinates. Draw a parallel...
cfly_show: Show in ggobi. Opens an instance ggobi for this dataset (if...
clarify: Clarify matrix Clarify matrix ordering to minimize off...
clusterfly: Creates a convenient data structure for dealing with a...
clusters: Extract clusters from clustering object.
cut.hierfly: Cut hierfly object into k clusters/colours.
ellipse: Create multivariate ellipse. Randomly sample points from a...
ggobi.hierfly: Visualise hierarchical clustering with GGobi. Displays both...
ggobi.som: Visualise Kohonen self organising maps with GGobi Displays...
hierarchical: Hierachical clustering Convenient methods for hierachical...
hierfly: Visualisig hierarchical clustering. This method supplements a...
mefly: Display model based clustering with mvn ellipses. Displays...
olive_example: Example clusterfly object created with olives data

Functions

addhull Man page Source code
as.data.frame.clusterfly Man page Source code
cfly_animate Man page Source code
cfly_clarify Man page Source code
cfly_cluster Man page Source code
cfly_dist Man page Source code
cfly_fluct Man page Source code
cfly_pcp Man page Source code
cfly_show Man page Source code
clarify Man page Source code
close.clusterfly Source code
clusterfly Man page Source code
clusters Man page Source code
clusters.default Source code
clusters.kmeans Source code
clusters.partition Source code
combinerows Source code
compact Source code
cut.hierfly Man page Source code
ellipse Man page Source code
ggobi.clusterfly Source code
ggobi.hierfly Man page Source code
ggobi.kohonen Source code
ggobi.som Man page Source code
ggobi.somiter Source code
hierarchical Man page Source code
hierfly Man page Source code
make_rect_net Source code
mefly Man page Source code
olive_example Man page Source code
package-clusterfly Man page
print.clusterfly Source code
print.hierfly Source code
qhull Source code
qhullout Source code
rescaler Source code
som_iterate Source code
summary.somiter Source code

Files

NAMESPACE
CHANGELOG
NEWS
R
R/hulls.r
R/som.r
R/model-based.r
R/hclust.r
R/sysdata.rda
R/ellipsoid.r
R/utils.r
R/som-iteration.r
R/clusterfly.r
R/data.r
R/extract.r
R/ggplot.r
MD5
DESCRIPTION
man
man/hierfly.Rd
man/olive_example.Rd
man/ggobi.hierfly.Rd
man/cfly_show.Rd
man/mefly.Rd
man/ellipse.Rd
man/clarify.Rd
man/clusterfly.Rd
man/cut.hierfly.Rd
man/cfly_dist.Rd
man/cfly_fluct.Rd
man/hierarchical.Rd
man/as.data.frame.clusterfly.Rd
man/cfly_cluster.Rd
man/cfly_pcp.Rd
man/clusters.Rd
man/ggobi.som.Rd
man/addhull.Rd
man/cfly_clarify.Rd
man/cfly_animate.Rd
LICENSE
clusterfly documentation built on May 19, 2017, 10:05 p.m.