calc_sc3_stability: Calculate SC3 stability
In clustree: Visualise Clusterings at Different Resolutions
calc_sc3_stability R Documentation
Calculate SC3 stability
Description
Calculate the SC3 stability index for every cluster at every resolution in a
set of clusterings. The index varies from 0 to 1, where 1 suggests that a
cluster is more stable across resolutions. See calc_sc3_stability_cluster()
for more details.
Usage
calc_sc3_stability(clusterings)
Arguments
clusterings
numeric matrix containing clustering information, each
column contains clustering at a separate resolution
Value
matrix with stability score for each cluster
clustree documentation built on Nov. 6, 2023, 1:07 a.m.
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| calc_sc3_stability | R Documentation |
Calculate SC3 stability
Description
Calculate the SC3 stability index for every cluster at every resolution in a
set of clusterings. The index varies from 0 to 1, where 1 suggests that a
cluster is more stable across resolutions. See calc_sc3_stability_cluster()
for more details.
Usage
calc_sc3_stability(clusterings)
Arguments
clusterings |
numeric matrix containing clustering information, each column contains clustering at a separate resolution |
Value
matrix with stability score for each cluster
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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