Man pages for coarseDataTools
Analysis of Coarsely Observed Data
| cd.fit | An S4 Class that stores a fitted coarse data object |
| cd.fit.mcmc | An S4 Class that stores a MCMC fit coarse data object |
| dgammaOff1 | Function that calculates dgamma with a offset of 1 (i.e., 1... |
| dic.fit | censored survival data |
| dic.fit.mcmc | Fits the distribution to the passed-in data using MCMC as... |
| EMforCFR | A function to estimate the relative case fatality ratio when... |
| exp.win.lengths | Exposure window lengths from an influenza outbreak at a NYC... |
| fluA.inc.per | Coarse incubation period data for influenza A |
| get.obs.type | Tries to guess the observation types (SIC, DIC, or exact). |
| loglikhd | Negative log likelihood for a dataset of interval-censored... |
| logLik-methods | Get the log-likelihood value of a 'cd.fit' or 'cd.fit.mcmc'... |
| mcmc.erlang | Does a metropolis hastings for the Erlang distribution |
| mcmcpack.ll | posterior log likelihood function to pass to MCMCpack sampler |
| nycH1N1 | Incubation period data from New York City Public Schools,... |
| pgammaOff1 | Function that calculates pgamma with a offset of 1 (i.e., 1... |
| precision.simulation | Simulate incubation period analyses with coarse data |
| simulated.outbreak.deaths | Simulated case and death reports from a fictional outbreak |
