View source: R/vulnerability.R
| vulnerability | R Documentation |
Computes the vulnerability of each node, defined as the relative drop in global efficiency when that node is removed from the network.
vulnerability(
x,
directed = NULL,
normalized = TRUE,
weighted = FALSE,
invert_weights = TRUE,
alpha = 1,
digits = NULL,
...
)
x |
Network input: matrix, igraph, network, cograph_network, or tna object. |
directed |
Logical or NULL. If NULL (default), auto-detect from matrix symmetry. Set TRUE to force directed, FALSE to force undirected. |
normalized |
Logical. If TRUE (default), return the proportional drop. If FALSE, return the raw efficiency difference. |
weighted |
Logical. If TRUE, honor edge weights when computing
shortest paths (Dijkstra); distance is |
invert_weights |
Logical. If TRUE (default) and weights are present,
invert weights to distances via |
alpha |
Weight-to-distance exponent (default 1). |
digits |
Integer or NULL. Round scores to this many decimal places. Default NULL (no rounding). |
... |
Additional arguments passed to |
V(i) = \frac{E_{global} - E_{global \setminus i}}{E_{global}}
where E_{global} is the global efficiency of the full network and
E_{global \setminus i} is the global efficiency after removing node i
and all its edges.
Global efficiency is defined as:
E_{global} = \frac{1}{n(n-1)} \sum_{i \neq j} \frac{1}{d(i,j)}
Nodes with high vulnerability are critical to the network's communication efficiency. Removing them causes the greatest drop in global efficiency.
Performance note: This function computes all-pairs shortest paths once for the full graph and once per node removal, giving O(n) calls to the shortest-path algorithm. A warning is issued for networks with more than 500 nodes.
A data frame of class "cograph_vulnerability" with columns:
Node labels.
Vulnerability scores, sorted descending.
The original input network and normalization mode are stored as attributes.
Latora, V. & Marchiori, M. (2007). A measure of centrality based on network efficiency. New Journal of Physics, 9(6), 188. \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1088/1367-2630/9/6/188")}
network_global_efficiency, robustness,
centrality
# Star network: hub is most vulnerable
star <- matrix(c(0,1,1,1, 1,0,0,0, 1,0,0,0, 1,0,0,0), 4, 4)
rownames(star) <- colnames(star) <- c("hub", "a", "b", "c")
cograph::vulnerability(star)
# Complete graph: all nodes equally vulnerable
k4 <- matrix(1, 4, 4); diag(k4) <- 0
rownames(k4) <- colnames(k4) <- c("A", "B", "C", "D")
cograph::vulnerability(k4)
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