Analysis of Convergent Evolution

allmaxdist | Calculates maxdist for all pairs of taxa in a phylogeny. |

calcchanges | Calculates all phenotypic changes that occur on all branches... |

convnum | Quantify convergence by the number of convergent events |

convnumsig | Assess the significance of convergent evolution using... |

convrat | Quantify convergence by the ratio of the current to maximum... |

convratsig | Tests the signifiance of convergent evolution by the ratio of... |

findanc | Find the ancestor of a given node in a phylogeny |

labelstonumbers | Converts taxon names to tip/edge numbers |

maxdist | Calculates the maximum phenotypic distance between the... |

multianc | Reconstructs ancestral states for multiple characters |

plotellipse | Plots an ellipse |

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