plot.cooccur: Function for producing a heatmap co-occurrence visualization.

In cooccur: Probabilistic Species Co-Occurrence Analysis in R

Description

Heatmap visualization of the pairwise species associations revealed by a cooccur analysis.

Usage

## S3 method for class 'cooccur'
plot(x, ...)

Arguments

x	Object of class cooccur.
...	Additional args

Author(s)

Daniel M Griffith

See Also

obs.v.exp,pair.profile

Examples

#data(finches)
#cooccur.finches <- cooccur(mat=finches,
#			   type="spp_site",
#			   thresh=TRUE,
#			   spp_names=TRUE)
#plot(cooccur.finches)

Example output

cooccur documentation built on May 2, 2019, 6:44 a.m.