API for corHMM
Analysis of Binary Character Evolution

Global functions
AddTaxonEverywhere Source code
ConvertPhangornReconstructions Man page Source code
DiscreteGamma Source code
FactorDataLewis Source code
FindAmpsLewis Source code
FormatForLikelihood Source code
GetSiteLikelihoods Source code
GetTipStateBruteForce Source code
GetTotalLikelihood Source code
LikelihoodCalculation Source code
RogersSwoffordish Source code
ancRECON Man page Source code
ancRECON.paint Source code
corDISC Man page Source code
corHMM Man page Source code
corPAINT Man page Source code
dev.cordisc Source code
dev.corhmm Source code
dev.corpaint Source code
dev.raydisc Man page Source code
dev.raydisc.rates.and.states Source code
factorData Source code
findAmps Source code
lewisMkv Man page Source code
match.tree.data Source code
plotRECON Man page Source code
primates Man page
primates.paint Man page
print.cordisc Source code
print.corhmm Source code
print.corpaint Source code
print.lewis.mkv Source code
print.raydisc Source code
rate.cat.set.corHMM Source code
rate.cat.set.rayDISC Source code
rate.mat.maker Man page Source code
rate.mat.set Source code
rate.mat.set.paint Source code
rate.par.drop Man page Source code
rate.par.eq Man page Source code
rayDISC Man page Source code
rayDISC.example Man page
readNexusMorph Man page Source code
corHMM documentation built on July 20, 2017, 1:03 a.m.