Man pages for corHMM
Hidden Markov Models of Character Evolution
| ancRECON | Ancestral state reconstruction |
| ConvertPhangornReconstructions | Convert phangorn reconstruction to a vector |
| corDISC | Correlated evolution binary traits |
| corHMM | Hidden Rates Model |
| fitCorrelationTest | Test for correlation |
| getFullMat | Combines several rate class index matrices |
| getRateMat4Dat | Produce an index matrix and legend from a dataset |
| makeSimmap | Simulate a character history |
| plotMKmodel | Plot a Markov model |
| plotRECON | Plot ancestral state reconstructions |
| primates | Example datasets |
| rayDISC | Evolution of categorical traits |
