exampleData: Small example dataset with 218 individuals.

In corehunter: Multi-Purpose Core Subset Selection

Small example dataset with 218 individuals.

Description

Data was genotyped using 190 SNP markers and 4 quantitative traits were recorded. Includes a precomputed distance matrix read from "extdata/distances.csv", genotypes read from "extdata/genotypes-biparental.csv" and phenotypes read from "extdata/phenotypes.csv". The distance matrix is computed from the genotypes (Modified Rogers' distance).

Usage

exampleData()

Details

Data was taken from the CIMMYT Research Data Repository (Study Global ID hdl:11529/10199; real data set 5, cycle 0).

Value

Core Hunter data of class chdata

Source

Cerón-Rojas, J. Jesús ; Crossa, José; Arief, Vivi N.; Kaye Basford; Rutkoski, Jessica; Jarquín, Diego ; Alvarado, Gregorio; Beyene, Yoseph; Semagn, Kassa ; DeLacy, Ian, 2015-06-04, "Application of a Genomics Selection Index to Real and Simulated Data", http://hdl.handle.net/11529/10199 V10

Examples

exampleData()

corehunter documentation built on Sept. 1, 2023, 5:07 p.m.