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tests/testthat/_snaps/as.list.md
In correlation: Methods for Correlation Analysis
as.list
Code
as.list(correlation(mtcars))
Output
r
---
Parameter | carb | gear | am | vs | qsec | wt | drat | hp | disp | cyl
-----------------------------------------------------------------------------------------
mpg | -0.55 | 0.48 | 0.60 | 0.66 | 0.42 | -0.87 | 0.68 | -0.78 | -0.85 | -0.85
cyl | 0.53 | -0.49 | -0.52 | -0.81 | -0.59 | 0.78 | -0.70 | 0.83 | 0.90 |
disp | 0.39 | -0.56 | -0.59 | -0.71 | -0.43 | 0.89 | -0.71 | 0.79 | |
hp | 0.75 | -0.13 | -0.24 | -0.72 | -0.71 | 0.66 | -0.45 | | |
drat | -0.09 | 0.70 | 0.71 | 0.44 | 0.09 | -0.71 | | | |
wt | 0.43 | -0.58 | -0.69 | -0.55 | -0.17 | | | | |
qsec | -0.66 | -0.21 | -0.23 | 0.74 | | | | | |
vs | -0.57 | 0.21 | 0.17 | | | | | | |
am | 0.06 | 0.79 | | | | | | | |
gear | 0.27 | | | | | | | | |
n_Obs
-------
Parameter | carb | gear | am | vs | qsec | wt | drat | hp | disp | cyl
-----------------------------------------------------------------------------------------
mpg | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00
cyl | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 |
disp | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | |
hp | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | | |
drat | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | | | |
wt | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | | | | |
qsec | 32.00 | 32.00 | 32.00 | 32.00 | | | | | |
vs | 32.00 | 32.00 | 32.00 | | | | | | |
am | 32.00 | 32.00 | | | | | | | |
gear | 32.00 | | | | | | | | |
p
---
Parameter | carb | gear | am | vs | qsec | wt | drat | hp | disp | cyl
-----------------------------------------------------------------------------------------------------------------------
mpg | 0.02 | 0.10 | 8.27e-03 | 1.09e-03 | 0.22 | 6.86e-09 | 5.86e-04 | 8.05e-06 | 4.78e-08 | 3.18e-08
cyl | 0.04 | 0.08 | 0.04 | 9.03e-07 | 0.01 | 5.60e-06 | 2.97e-04 | 1.74e-07 | 9.92e-11 |
disp | 0.30 | 0.02 | 0.01 | 2.04e-04 | 0.20 | 6.60e-10 | 2.04e-04 | 3.36e-06 | |
hp | 3.44e-05 | 1.00 | 1.00 | 1.24e-04 | 2.13e-04 | 1.29e-03 | 0.17 | | |
drat | 1.00 | 2.97e-04 | 1.94e-04 | 0.19 | 1.00 | 1.94e-04 | | | |
wt | 0.20 | 0.01 | 3.83e-04 | 0.02 | 1.00 | | | | |
qsec | 1.36e-03 | 1.00 | 1.00 | 4.43e-05 | | | | | |
vs | 0.02 | 1.00 | 1.00 | | | | | | |
am | 1.00 | 2.80e-06 | | | | | | | |
gear | 1.00 | | | | | | | | |
Code
as.list(correlation(datawizard::data_group(msleep, "vore"), method = "spearman"))
Output
=======
carni
=======
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
carni | sleep_total | -0.48 | -0.59 | -1.00 | 0.31 | 0.95
carni | sleep_rem | -0.72 | -0.26 | -0.95 | 0.46 |
carni | sleep_cycle | -0.56 | -0.80 | -0.31 | |
carni | awake | 0.48 | 0.59 | | |
carni | brainwt | 0.82 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
carni | sleep_total | 19.00 | 9.00 | 19.00 | 5.00 | 10.00
carni | sleep_rem | 10.00 | 6.00 | 10.00 | 5.00 |
carni | sleep_cycle | 5.00 | 4.00 | 5.00 | |
carni | awake | 19.00 | 9.00 | | |
carni | brainwt | 9.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
---------------------------------------------------------------------------
carni | sleep_total | 0.37 | 0.73 | 0.00 | 1.00 | 3.19e-04
carni | sleep_rem | 0.20 | 1.00 | 3.19e-04 | 1.00 |
carni | sleep_cycle | 1.00 | 1.00 | 1.00 | |
carni | awake | 0.37 | 0.73 | | |
carni | brainwt | 0.09 | | | |
=======
herbi
=======
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
herbi | sleep_total | -0.77 | -0.86 | -1.00 | -0.44 | 0.92
herbi | sleep_rem | -0.72 | -0.75 | -0.92 | -0.48 |
herbi | sleep_cycle | 0.74 | 0.74 | 0.44 | |
herbi | awake | 0.77 | 0.86 | | |
herbi | brainwt | 0.98 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
herbi | sleep_total | 32.00 | 20.00 | 32.00 | 12.00 | 24.00
herbi | sleep_rem | 24.00 | 16.00 | 24.00 | 12.00 |
herbi | sleep_cycle | 12.00 | 11.00 | 12.00 | |
herbi | awake | 32.00 | 20.00 | | |
herbi | brainwt | 20.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------------
herbi | sleep_total | 3.42e-06 | 8.71e-06 | 0.00 | 0.35 | 5.00e-09
herbi | sleep_rem | 4.65e-04 | 4.43e-03 | 5.00e-09 | 0.35 |
herbi | sleep_cycle | 0.03 | 0.04 | 0.35 | |
herbi | awake | 3.42e-06 | 8.71e-06 | | |
herbi | brainwt | 5.17e-13 | | | |
=========
insecti
=========
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
--------------------------------------------------------------------------
insecti | sleep_total | -0.60 | -0.60 | -1.00 | 0.50 | -0.40
insecti | sleep_rem | 0.80 | 0.80 | 0.40 | -1.00 |
insecti | sleep_cycle | -0.50 | -0.50 | -0.50 | |
insecti | awake | 0.60 | 0.60 | | |
insecti | brainwt | 1.00 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
--------------------------------------------------------------------------
insecti | sleep_total | 5.00 | 5.00 | 5.00 | 3.00 | 4.00
insecti | sleep_rem | 4.00 | 4.00 | 4.00 | 3.00 |
insecti | sleep_cycle | 3.00 | 3.00 | 3.00 | |
insecti | awake | 5.00 | 5.00 | | |
insecti | brainwt | 5.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
-------------------------------------------------------------------------------
insecti | sleep_total | 1.00 | 1.00 | 1.46e-22 | 1.00 | 1.00
insecti | sleep_rem | 1.00 | 1.00 | 1.00 | 0.00 |
insecti | sleep_cycle | 1.00 | 1.00 | 1.00 | |
insecti | awake | 1.00 | 1.00 | | |
insecti | brainwt | 5.56e-23 | | | |
======
omni
======
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
omni | sleep_total | -0.10 | -0.28 | -1.00 | -0.24 | 0.14
omni | sleep_rem | -0.20 | -0.39 | -0.14 | -0.46 |
omni | sleep_cycle | 0.80 | 0.92 | 0.24 | |
omni | awake | 0.10 | 0.28 | | |
omni | brainwt | 0.91 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
omni | sleep_total | 20.00 | 17.00 | 20.00 | 11.00 | 18.00
omni | sleep_rem | 18.00 | 17.00 | 18.00 | 11.00 |
omni | sleep_cycle | 11.00 | 11.00 | 11.00 | |
omni | awake | 20.00 | 17.00 | | |
omni | brainwt | 17.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
---------------------------------------------------------------------------
omni | sleep_total | 1.00 | 1.00 | 0.00 | 1.00 | 1.00
omni | sleep_rem | 1.00 | 1.00 | 1.00 | 1.00 |
omni | sleep_cycle | 0.04 | 7.73e-04 | 1.00 | |
omni | awake | 1.00 | 1.00 | | |
omni | brainwt | 7.64e-06 | | | |
Code
as.list(correlation(datawizard::data_group(mtcars, "am"), select = c("cyl",
"wt"), select2 = "hp", method = "percentage"))
Output
===
0
===
r
---
Group | Parameter | hp
------------------------
0 | cyl | 0.87
0 | wt | 0.83
n_Obs
-------
Group | Parameter | hp
-------------------------
0 | cyl | 19.00
0 | wt | 19.00
p
---
Group | Parameter | hp
----------------------------
0 | cyl | 2.11e-06
0 | wt | 1.11e-05
===
1
===
r
---
Group | Parameter | hp
------------------------
1 | cyl | 0.83
1 | wt | 0.80
n_Obs
-------
Group | Parameter | hp
-------------------------
1 | cyl | 13.00
1 | wt | 13.00
p
---
Group | Parameter | hp
----------------------------
1 | cyl | 9.58e-04
1 | wt | 1.04e-03
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as.list
Code
as.list(correlation(mtcars))
Output
r
---
Parameter | carb | gear | am | vs | qsec | wt | drat | hp | disp | cyl
-----------------------------------------------------------------------------------------
mpg | -0.55 | 0.48 | 0.60 | 0.66 | 0.42 | -0.87 | 0.68 | -0.78 | -0.85 | -0.85
cyl | 0.53 | -0.49 | -0.52 | -0.81 | -0.59 | 0.78 | -0.70 | 0.83 | 0.90 |
disp | 0.39 | -0.56 | -0.59 | -0.71 | -0.43 | 0.89 | -0.71 | 0.79 | |
hp | 0.75 | -0.13 | -0.24 | -0.72 | -0.71 | 0.66 | -0.45 | | |
drat | -0.09 | 0.70 | 0.71 | 0.44 | 0.09 | -0.71 | | | |
wt | 0.43 | -0.58 | -0.69 | -0.55 | -0.17 | | | | |
qsec | -0.66 | -0.21 | -0.23 | 0.74 | | | | | |
vs | -0.57 | 0.21 | 0.17 | | | | | | |
am | 0.06 | 0.79 | | | | | | | |
gear | 0.27 | | | | | | | | |
n_Obs
-------
Parameter | carb | gear | am | vs | qsec | wt | drat | hp | disp | cyl
-----------------------------------------------------------------------------------------
mpg | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00
cyl | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 |
disp | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | |
hp | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | | |
drat | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | | | |
wt | 32.00 | 32.00 | 32.00 | 32.00 | 32.00 | | | | |
qsec | 32.00 | 32.00 | 32.00 | 32.00 | | | | | |
vs | 32.00 | 32.00 | 32.00 | | | | | | |
am | 32.00 | 32.00 | | | | | | | |
gear | 32.00 | | | | | | | | |
p
---
Parameter | carb | gear | am | vs | qsec | wt | drat | hp | disp | cyl
-----------------------------------------------------------------------------------------------------------------------
mpg | 0.02 | 0.10 | 8.27e-03 | 1.09e-03 | 0.22 | 6.86e-09 | 5.86e-04 | 8.05e-06 | 4.78e-08 | 3.18e-08
cyl | 0.04 | 0.08 | 0.04 | 9.03e-07 | 0.01 | 5.60e-06 | 2.97e-04 | 1.74e-07 | 9.92e-11 |
disp | 0.30 | 0.02 | 0.01 | 2.04e-04 | 0.20 | 6.60e-10 | 2.04e-04 | 3.36e-06 | |
hp | 3.44e-05 | 1.00 | 1.00 | 1.24e-04 | 2.13e-04 | 1.29e-03 | 0.17 | | |
drat | 1.00 | 2.97e-04 | 1.94e-04 | 0.19 | 1.00 | 1.94e-04 | | | |
wt | 0.20 | 0.01 | 3.83e-04 | 0.02 | 1.00 | | | | |
qsec | 1.36e-03 | 1.00 | 1.00 | 4.43e-05 | | | | | |
vs | 0.02 | 1.00 | 1.00 | | | | | | |
am | 1.00 | 2.80e-06 | | | | | | | |
gear | 1.00 | | | | | | | | |
Code
as.list(correlation(datawizard::data_group(msleep, "vore"), method = "spearman"))
Output
=======
carni
=======
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
carni | sleep_total | -0.48 | -0.59 | -1.00 | 0.31 | 0.95
carni | sleep_rem | -0.72 | -0.26 | -0.95 | 0.46 |
carni | sleep_cycle | -0.56 | -0.80 | -0.31 | |
carni | awake | 0.48 | 0.59 | | |
carni | brainwt | 0.82 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
carni | sleep_total | 19.00 | 9.00 | 19.00 | 5.00 | 10.00
carni | sleep_rem | 10.00 | 6.00 | 10.00 | 5.00 |
carni | sleep_cycle | 5.00 | 4.00 | 5.00 | |
carni | awake | 19.00 | 9.00 | | |
carni | brainwt | 9.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
---------------------------------------------------------------------------
carni | sleep_total | 0.37 | 0.73 | 0.00 | 1.00 | 3.19e-04
carni | sleep_rem | 0.20 | 1.00 | 3.19e-04 | 1.00 |
carni | sleep_cycle | 1.00 | 1.00 | 1.00 | |
carni | awake | 0.37 | 0.73 | | |
carni | brainwt | 0.09 | | | |
=======
herbi
=======
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
herbi | sleep_total | -0.77 | -0.86 | -1.00 | -0.44 | 0.92
herbi | sleep_rem | -0.72 | -0.75 | -0.92 | -0.48 |
herbi | sleep_cycle | 0.74 | 0.74 | 0.44 | |
herbi | awake | 0.77 | 0.86 | | |
herbi | brainwt | 0.98 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
herbi | sleep_total | 32.00 | 20.00 | 32.00 | 12.00 | 24.00
herbi | sleep_rem | 24.00 | 16.00 | 24.00 | 12.00 |
herbi | sleep_cycle | 12.00 | 11.00 | 12.00 | |
herbi | awake | 32.00 | 20.00 | | |
herbi | brainwt | 20.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------------
herbi | sleep_total | 3.42e-06 | 8.71e-06 | 0.00 | 0.35 | 5.00e-09
herbi | sleep_rem | 4.65e-04 | 4.43e-03 | 5.00e-09 | 0.35 |
herbi | sleep_cycle | 0.03 | 0.04 | 0.35 | |
herbi | awake | 3.42e-06 | 8.71e-06 | | |
herbi | brainwt | 5.17e-13 | | | |
=========
insecti
=========
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
--------------------------------------------------------------------------
insecti | sleep_total | -0.60 | -0.60 | -1.00 | 0.50 | -0.40
insecti | sleep_rem | 0.80 | 0.80 | 0.40 | -1.00 |
insecti | sleep_cycle | -0.50 | -0.50 | -0.50 | |
insecti | awake | 0.60 | 0.60 | | |
insecti | brainwt | 1.00 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
--------------------------------------------------------------------------
insecti | sleep_total | 5.00 | 5.00 | 5.00 | 3.00 | 4.00
insecti | sleep_rem | 4.00 | 4.00 | 4.00 | 3.00 |
insecti | sleep_cycle | 3.00 | 3.00 | 3.00 | |
insecti | awake | 5.00 | 5.00 | | |
insecti | brainwt | 5.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
-------------------------------------------------------------------------------
insecti | sleep_total | 1.00 | 1.00 | 1.46e-22 | 1.00 | 1.00
insecti | sleep_rem | 1.00 | 1.00 | 1.00 | 0.00 |
insecti | sleep_cycle | 1.00 | 1.00 | 1.00 | |
insecti | awake | 1.00 | 1.00 | | |
insecti | brainwt | 5.56e-23 | | | |
======
omni
======
rho
-----
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
omni | sleep_total | -0.10 | -0.28 | -1.00 | -0.24 | 0.14
omni | sleep_rem | -0.20 | -0.39 | -0.14 | -0.46 |
omni | sleep_cycle | 0.80 | 0.92 | 0.24 | |
omni | awake | 0.10 | 0.28 | | |
omni | brainwt | 0.91 | | | |
n_Obs
-------
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
------------------------------------------------------------------------
omni | sleep_total | 20.00 | 17.00 | 20.00 | 11.00 | 18.00
omni | sleep_rem | 18.00 | 17.00 | 18.00 | 11.00 |
omni | sleep_cycle | 11.00 | 11.00 | 11.00 | |
omni | awake | 20.00 | 17.00 | | |
omni | brainwt | 17.00 | | | |
p
---
Group | Parameter | bodywt | brainwt | awake | sleep_cycle | sleep_rem
---------------------------------------------------------------------------
omni | sleep_total | 1.00 | 1.00 | 0.00 | 1.00 | 1.00
omni | sleep_rem | 1.00 | 1.00 | 1.00 | 1.00 |
omni | sleep_cycle | 0.04 | 7.73e-04 | 1.00 | |
omni | awake | 1.00 | 1.00 | | |
omni | brainwt | 7.64e-06 | | | |
Code
as.list(correlation(datawizard::data_group(mtcars, "am"), select = c("cyl",
"wt"), select2 = "hp", method = "percentage"))
Output
===
0
===
r
---
Group | Parameter | hp
------------------------
0 | cyl | 0.87
0 | wt | 0.83
n_Obs
-------
Group | Parameter | hp
-------------------------
0 | cyl | 19.00
0 | wt | 19.00
p
---
Group | Parameter | hp
----------------------------
0 | cyl | 2.11e-06
0 | wt | 1.11e-05
===
1
===
r
---
Group | Parameter | hp
------------------------
1 | cyl | 0.83
1 | wt | 0.80
n_Obs
-------
Group | Parameter | hp
-------------------------
1 | cyl | 13.00
1 | wt | 13.00
p
---
Group | Parameter | hp
----------------------------
1 | cyl | 9.58e-04
1 | wt | 1.04e-03
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