read_bigbed: Read data from bigBed files.

In cpp11bigwig: Read bigWig and bigBed Files

Read data from bigBed files.

Description

Read data from bigBed files.

Usage

read_bigbed(bbfile, chrom = NULL, start = NULL, end = NULL, convert = TRUE)

Arguments

bbfile	filename for bigBed file
chrom	read data for specific chromosome
start	start position for data
end	end position for data
convert	convert bigBed values to individual columns

Value

tibble

See Also

https://github.com/dpryan79/libBigWig

https://github.com/brentp/bw-python

Examples

bb <- system.file("extdata", "test.bb", package = "cpp11bigwig")

read_bigbed(bb)

read_bigbed(bb, chrom = "chr10")

cpp11bigwig documentation built on April 3, 2025, 7:35 p.m.