cytometree: Automated Cytometry Gating and Annotation

Given the hypothesis of a bi-modal distribution of cells for each marker, the algorithm constructs a binary tree, the nodes of which are subpopulations of cells. At each node, observed cells and markers are modeled by both a family of normal distributions and a family of bi-modal normal mixture distributions. Splitting is done according to a normalized difference of AIC between the two families.

Package details

AuthorChariff Alkhassim, Boris Hejblum, Anthony Devaux
MaintainerBoris Hejblum <[email protected]>
LicenseLGPL-3 | file LICENSE
Package repositoryView on CRAN
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cytometree documentation built on Aug. 29, 2018, 1:03 a.m.