gl.colors: Returns a list of colors for use in plots

In dartR.base: Analysing 'SNP' and 'Silicodart' Data - Basic Functions

Returns a list of colors for use in plots

Description

Creates a vector of colors in hex (e.g. "#3B9AB2" "#78B7C5") based on user selected category (parameter type).

• "2" [two colors]

• "2c" [two colors contrast]

• "3" [three colors]

• 4" [four colors]

• "pal" [need to be specify the palette type and the number of colors]

A palette of colors can be specified via "div" [divergent], "dis" [discrete], "con" [convergent], "vir" [viridis]. Be aware a palette needs the number of colors specified as well. It returns a function and therefore the number of colors needs to be a part of the function call. Check the examples to see how this works.

Usage

gl.colors(type = 2, verbose = NULL)

Arguments

type	Type of color (2, 3 or 4 colors, or palette, see description) [default 2].
verbose	– verbosity: 0, silent or fatal errors; 1, begin and end; 2, progress log; 3, progress and results summary; 5, full report [default 2 or as specified using gl.set.verbosity].

Value

returns colors as a vector

Author(s)

Custodian: Bernd Gruber – Post to https://groups.google.com/d/forum/dartr

See Also

Other graphics: gl.map.interactive(), gl.plot.heatmap(), gl.report.ld.map(), gl.select.colors(), gl.select.shapes(), gl.smearplot(), gl.tree.nj()

Examples

gl.colors(2)
gl.colors("2")
gl.colors("2c")
#five discrete colors
gl.colors(type="dis")(5)
#seven divergent colors
gl.colors("div")(7)

dartR.base documentation built on April 4, 2025, 2:45 a.m.