deepredeff: Deep Learning Prediction of Effectors

A tool that contains trained deep learning models for predicting effector proteins. 'deepredeff' has been trained to identify effector proteins using a set of known experimentally validated effectors from either bacteria, fungi, or oomycetes. Documentation is available via several vignettes, and the paper by Kristianingsih and MacLean (2020) <doi:10.1101/2020.07.08.193250>.

Package details

AuthorRuth Kristianingsih [aut, cre, cph] (<https://orcid.org/0000-0003-1873-6203>)
MaintainerRuth Kristianingsih <ruth.kristianingsih30@gmail.com>
LicenseMIT + file LICENSE
Version0.1.0
URL https://github.com/ruthkr/deepredeff/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("deepredeff")

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deepredeff documentation built on Oct. 23, 2020, 8:30 p.m.