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A tool that contains trained deep learning models for predicting effector proteins. 'deepredeff' has been trained to identify effector proteins using a set of known experimentally validated effectors from either bacteria, fungi, or oomycetes. Documentation is available via several vignettes, and the paper by Kristianingsih and MacLean (2020) <doi:10.1101/2020.07.08.193250>.
Package details |
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Author | Ruth Kristianingsih [aut, cre, cph] (<https://orcid.org/0000-0003-1873-6203>) |
Maintainer | Ruth Kristianingsih <ruth.kristianingsih30@gmail.com> |
License | MIT + file LICENSE |
Version | 0.1.1 |
URL | https://github.com/ruthkr/deepredeff/ |
Package repository | View on CRAN |
Installation |
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