deepredeff: Deep Learning Prediction of Effectors

A tool that contains trained deep learning models for predicting effector proteins. 'deepredeff' has been trained to identify effector proteins using a set of known experimentally validated effectors from either bacteria, fungi, or oomycetes. Documentation is available via several vignettes, and the paper by Kristianingsih and MacLean (2020) <doi:10.1101/2020.07.08.193250>.

Package details

AuthorRuth Kristianingsih [aut, cre, cph] (<>)
MaintainerRuth Kristianingsih <>
LicenseMIT + file LICENSE
Package repositoryView on CRAN
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deepredeff documentation built on Oct. 23, 2020, 8:30 p.m.