Files in deepredeff
Deep Learning Prediction of Effectors

NEWS.md
MD5
README.md
NAMESPACE
DESCRIPTION
LICENSE
build/vignette.rds
R/load_model.R R/tbl_deepredeff.R R/prediction.R
R/sysdata.rda
R/ensemble_methods.R R/utils.R R/encoding_methods.R R/install.R R/deepredeff.R R/utils-pipe.R R/input_to_df.R R/prediction_helper.R vignettes/overview.Rmd vignettes/predict.Rmd man/get_ensemble_method.Rd man/fasta_to_df.Rd man/prediction_mapper.Rd man/pipe.Rd man/package_glob.Rd man/encode_one_hot.Rd man/predict_effector.Rd man/encode_integer.Rd man/plot.tbl_deepredeff.Rd man/ensemble_weighted.Rd man/aasset_to_df.Rd man/aas_to_df.Rd man/summary.tbl_deepredeff.Rd man/load_model.Rd man/install_tensorflow.Rd man/deepredeff.Rd
man/figures/README-pred_result_plot-1.png
man/figures/logo.png
tests/testthat.R tests/testthat/test-prediction.R tests/testthat/test-ensemble_methods.R tests/testthat/test-encoding.R tests/testthat/test-transform_input.R
inst/doc/predict.html
inst/doc/overview.html
inst/doc/overview.Rmd inst/doc/predict.Rmd inst/doc/overview.R inst/doc/predict.R
inst/extdata/weights/all_cnn_lstm.hdf5
inst/extdata/weights/fungi_cnn_lstm.hdf5
inst/extdata/weights/bacteria_lstm_emb.hdf5
inst/extdata/weights/oomycete_cnn_lstm.hdf5
inst/extdata/weights/bacteria_gru_emb.hdf5
inst/extdata/weights/bacteria_cnn_lstm.hdf5
inst/extdata/weights/all_gru_emb.hdf5
inst/extdata/weights/all_cnn_gru.hdf5
inst/extdata/weights/bacteria_cnn_gru.hdf5
inst/extdata/weights/all_lstm_emb.hdf5
inst/extdata/example/oomycete_sample.fasta
inst/extdata/example/fungi_sample.fasta
inst/extdata/example/bacteria_sample.fasta
deepredeff documentation built on Oct. 23, 2020, 8:30 p.m.