NEWS.md

In deeptime: Plotting Tools for Anyone Working in Deep Time

deeptime 1.0.1

• Fixed the bounds of the Kungurian stage in the built-in stages data
• Updated License to GPL >= 3
• Changed tidyverse to dplyr and magrittr in Suggests and vignettes

deeptime 1.0.0

• Updated built-in timescales to 2022/10 version of GTS
• Added a geom for making phylomorphospaces
• Added vignettes
• Renamed getScaleData() to get_scale_data()
• Soft deprecated gggeo_scale() and gggeo_scale_old()

deeptime 0.3.0

deeptime now requires ggplot2 version 3.3.0 or higher. Several new features and fixed compatibility with various ggplot2 versions.

• Added coord_geo_polar(), for adding timescales to polar plots (#33)
• Added color and fill discrete scales that use the GTS colors (#43)
• Fixed coord_geo_polar() and coord_trans_xy() for ggplot2 version 3.4.0 (#44)
• Fixed coord_geo() for ggplot2 version 3.4.0
• Added tests for both ggplot2 version 3.3.6 and 3.4.0
• Removed uses of getFromNamespace (#45)

deeptime 0.2.3

• Updated built-in timescales to 2022/02 version of GTS
• Better name handling and documentation for getScaleData() (#42)

deeptime 0.2.2

• Skip tests when suggested packages are unavailable
• Added the ability to specify label color (#40)

deeptime 0.2.1

Updated built-in timescales

• Updated the built-in timescales using the Macrostrat API (#39)
• Fixed CRAN checks when ggtree is missing (#38)

deeptime 0.2.0

Several new features and bug fixes.

• coord_geo() now works with discrete axes (#32 and #35)
• Fixed a bug that prevented the use of custom interval data
• Added option to use ggfittext to automatically resize labels (#19)
• Added coord_trans_flip() (#20)
• Fixed axis labels for coord_trans_xy() (#36)
• Added tests with testthat (#34)

deeptime 0.1.0

First minor release (released on CRAN!)

• Fixed ability to use text transformations (from scales) in coord_geo() (#30)
• Added automatic R CMD check Github Actions
• Fixed S3 method consistency and other R CMD check warnings and notes
• Fixed coord_geo() when axis breaks were reversed or NULL (#23 and #29)
• Added packages from examples and README to Suggests

deeptime 0.0.6

Several bug fixes and minor features.

• Added ability to specify a layout for ggarrange2() (#21)
• Added ability to center labels for time intervals that are broken by axis limits (#18)
• Fixed gggeo_scale() for ggplot2>=3.3.0 (#22)
• Replaced README examples with examples using real data (#28)
• Fixed using first letters for the pos argument
• Fixed label order (#26)
• Switched from Travis to Github Actions (#27)
• Fixed handling of axis tick labels for coord_trans_xy (#31)

deeptime 0.0.5

Added coord_geo(), which is a coordinate system for ggplot2 that allows for adding highly customized timescales to ggplot objects. Both gggeo_scale() and gggeo_scale_old are preserved but will receive notably less maintenance moving forward.

• Updated examples and documentation to use coord_geo()
• Added coord_trans_xy(), which is a coordinate system for ggplot2 that is similar to coord_trans() but allows for 2-dimensional transformations
• Added disparity_through_time() which allows for plotting 2-dimensional data across a 3rd dimension (using lattice)

deeptime 0.0.4

ggarrange2() now accepts geo_scale objects and other grobified ggplots

• Fixed missing axes and axis titles

deeptime 0.0.3

Minor release for bug fixes

• Added options to customize borders and line width
• Fixed abbreviations for stages named "Series X" (#9)
• Fixed scale when x-axis crosses 0 (#10, #12)
• Preserve margins of original plots (#13)
• Fixed scale for plots with multiple panels

deeptime 0.0.2

Complete redesign of gggeo_scale() that adds the scale outside of the plotting space using gtable. The old version of gggeo_scale() is preserved as gggeo_scale_old().

• Can now pull timescales from the Macrostrat API (#8)

deeptime 0.0.1

First full release. Adds scale onto the bottom of a ggplot.

• Depends on R>3.4 (#1)
• Fixed adding scales to faceted plots (#2)
• Added timescale data from PBDB API (#3)
• Fixed the use of ggtree when a geom has its own data (#5)
• Fixed the stacking of multiple scales (#6)
• Fixed documentation spelling (#7)

deeptime documentation built on Feb. 16, 2023, 10:59 p.m.