norm.quantile-methods: Quantile normalization function

In demi: Differential Expression from Multiple Indicators

Description

A function for normalizing the expression matrix with quantiles. In the current It tries to mimic rma quantile normalization. In the current state it is not used in DEMI analysis.

Usage

norm.quantile(object)

## S4 method for signature 'matrix'
norm.quantile(object)

Arguments

object

A matrix. The raw expression matrix.

Value

A data.frame representing the normalized expression matrix.

Author(s)

Sten Ilmjarv

Examples

## Not run: 

# Create a matrix with 1000 values that represents raw expression values
rawmatrix <- matrix(rexp(1000, rate=1), ncol=8)

# Normalize the raw expression matrix
normmatrix <- norm.quantile( rawmatrix )


## End(Not run)

demi documentation built on May 2, 2019, 11:11 a.m.