devRate: Quantify Relationship Between Developmental Rate and Temperature in Ectotherms

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A set of functions to ease quantifying the relationship between developmental rate and temperature. The package comprises a set of models and estimated parameters borrowed from a literature review in ectotherms.

Author
Francois Rebaudo [aut, cre], Quentin Struelens [aut]
Date of publication
2016-08-30 00:37:42
Maintainer
Francois Rebaudo <francois.rebaudo@ird.fr>
License
GPL-2
Version
0.1.0

View on CRAN

Man pages

analytis_77
Analytis equation of developmental rate as a function of...
beta_95
Beta equation of developmental rate as a function of...
briere1_99
Briere et al equation 1 of developmental rate as a function...
briere2_99
Briere et al equation 2 of developmental rate as a function...
campbell_74
Campbell et al. equation of developmental rate as a function...
compDifDays
Compute the inverse of number of days between dates
compDifDaysDf
Compute the inverse of number of days between dates from a...
damos_08
Simplified beta type equation of developmental rate as a...
damos_11
Inverse second-order polynomial equation of developmental...
davidson_44
Davidson equation of developmental rate as a function of...
devRate
devRate: A package for quantifying the relationship between...
devRateEqList
The list of all available equations of developmental rate as...
devRateFind
Find models for species
devRateIBM
Forecast ectotherm phenology as a function of temperature and...
devRateIBMgen
Number of generations
devRateIBMPlot
Plot phenology table
devRateInfo
Display information about an equation
devRateMap
Predict developmental rate from a a map of temperatures
devRateModel
Compute non-linear regression
devRatePlot
Plot the empirical points and the regression
devRatePlotInfo
Plot parameter estimates from the literature
hansen_11
Hansen equation of developmental rate as a function of...
harcourtYee_82
Harcourt and Yee equation of developmental rate as a function...
hilbertLogan_83
Holling type III equation of developmental rate as a function...
janisch_32
Janisch equation of developmental rate as a function of...
kontodimas_04
Kontodimas et al. equation of developmental rate as a...
lactin1_95
Lactin et al. equation 1 of developmental rate as a function...
lactin2_95
Lactin et al. equation 2 of developmental rate as a function...
lamb_92
Lamb equation of developmental rate as a function of...
logan10_76
Logan et al. equation 10 of developmental rate as a function...
logan6_76
Logan et al. equation 6 of developmental rate as a function...
perf2_11
Performance-2 equation of developmental rate as a function of...
poly2
Second-order polynomial equation of developmental rate as a...
poly4
Fourth-order polynomial equation of developmental rate as a...
ratkowsky_82
Ratkowsky equation of developmental rate as a function of...
regniere_12
Regniere equation of developmental rate as a function of...
rootsq_82
Root square equation of developmental rate as a function of...
schoolfield_81
Schoolfield et al. equation of developmental rate as a...
sharpeDeMichele_77
Sharpe and DeMichele equation of developmental rate as a...
shi_11
Shi equation of developmental rate as a function of...
stinner_74
Stinner et al equation of developmental rate as a function of...
taylor_81
Taylor equation of developmental rate as a function of...
wang_82
Wang et al. equation of developmental rate as a function of...
wangengel_98
Wang and Engel equation of developmental rate as a function...

Files in this package

devRate
devRate/inst
devRate/inst/doc
devRate/inst/doc/example_tropical.html
devRate/inst/doc/example_tropical.Rmd
devRate/inst/doc/example_tropical.R
devRate/NAMESPACE
devRate/NEWS.md
devRate/data
devRate/data/logan6_76.RData
devRate/data/kontodimas_04.RData
devRate/data/lactin1_95.RData
devRate/data/damos_08.RData
devRate/data/campbell_74.RData
devRate/data/logan10_76.RData
devRate/data/damos_11.RData
devRate/data/stinner_74.RData
devRate/data/perf2_11.RData
devRate/data/analytis_77.RData
devRate/data/regniere_12.RData
devRate/data/hilbertLogan_83.RData
devRate/data/briere1_99.RData
devRate/data/beta_95.RData
devRate/data/taylor_81.RData
devRate/data/shi_11.RData
devRate/data/janisch_32.RData
devRate/data/lactin2_95.RData
devRate/data/wang_82.RData
devRate/data/poly4.RData
devRate/data/sharpeDeMichele_77.RData
devRate/data/schoolfield_81.RData
devRate/data/poly2.RData
devRate/data/wangengel_98.RData
devRate/data/harcourtYee_82.RData
devRate/data/ratkowsky_82.RData
devRate/data/lamb_92.RData
devRate/data/hansen_11.RData
devRate/data/devRateEqList.RData
devRate/data/rootsq_82.RData
devRate/data/davidson_44.RData
devRate/data/briere2_99.RData
devRate/R
devRate/R/devRate_info.R
devRate/R/devRate_utils.R
devRate/R/devRate_plot.R
devRate/R/data.R
devRate/R/devRate.R
devRate/R/devRate_pheno.R
devRate/R/devRate_map.R
devRate/R/devRate_nls.R
devRate/R/devRate_find.R
devRate/vignettes
devRate/vignettes/example_tropical.Rmd
devRate/README.md
devRate/MD5
devRate/build
devRate/build/vignette.rds
devRate/DESCRIPTION
devRate/man
devRate/man/devRatePlot.Rd
devRate/man/kontodimas_04.Rd
devRate/man/regniere_12.Rd
devRate/man/devRateModel.Rd
devRate/man/briere2_99.Rd
devRate/man/compDifDays.Rd
devRate/man/harcourtYee_82.Rd
devRate/man/lactin2_95.Rd
devRate/man/shi_11.Rd
devRate/man/devRateIBMPlot.Rd
devRate/man/hilbertLogan_83.Rd
devRate/man/sharpeDeMichele_77.Rd
devRate/man/perf2_11.Rd
devRate/man/compDifDaysDf.Rd
devRate/man/stinner_74.Rd
devRate/man/ratkowsky_82.Rd
devRate/man/lactin1_95.Rd
devRate/man/devRateFind.Rd
devRate/man/devRate.Rd
devRate/man/lamb_92.Rd
devRate/man/devRateIBM.Rd
devRate/man/devRateInfo.Rd
devRate/man/devRateMap.Rd
devRate/man/logan10_76.Rd
devRate/man/taylor_81.Rd
devRate/man/janisch_32.Rd
devRate/man/rootsq_82.Rd
devRate/man/logan6_76.Rd
devRate/man/wang_82.Rd
devRate/man/poly2.Rd
devRate/man/poly4.Rd
devRate/man/damos_11.Rd
devRate/man/devRateEqList.Rd
devRate/man/davidson_44.Rd
devRate/man/damos_08.Rd
devRate/man/wangengel_98.Rd
devRate/man/beta_95.Rd
devRate/man/analytis_77.Rd
devRate/man/campbell_74.Rd
devRate/man/briere1_99.Rd
devRate/man/schoolfield_81.Rd
devRate/man/hansen_11.Rd
devRate/man/devRateIBMgen.Rd
devRate/man/devRatePlotInfo.Rd