devRateIBMdataBase: Forecast ectotherm phenology as a function of temperature and...

In devRate: Quantify the Relationship Between Development Rate and Temperature in Ectotherms

Forecast ectotherm phenology as a function of temperature and development rate models available in the package database

Description

Forecast ectotherm phenology as a function of temperature and development rate models available in the package database

Usage

devRateIBMdataBase(
  tempTS,
  timeStepTS,
  eq,
  species,
  lifeStages,
  numInd = 10,
  stocha,
  timeLayEggs = 1
)

Arguments

tempTS	The temperature time series (a vector).
timeStepTS	The time step of the temperature time series (a numeric with 1 = one day).
eq	The name of the equation (e.g., lactin2_95).
species	The species for the model (e.g., "Sesamia nonagrioides").
lifeStages	The life stages available for the species and the model.
numInd	The number of individuals for the simulation (an integer).
stocha	The standard deviation of a Normal distribution centered on development rate to create stochasticity among individuals (a numeric).
timeLayEggs	The delay between emergence of adults and the time where females lay eggs in time steps (a numeric).

Value

A list with three elements: the table of phenology for each individual, the models used (nls objects), and the time series for temperature.

Examples

forecastLactin2_95 <- devRateIBMdataBase(
  tempTS = rnorm(n = 20, mean = 20, sd = 1),
  timeStepTS = 10,
  eq = lactin2_95,
  species = "Sesamia nonagrioides",
  lifeStages = c("eggs", "larva", "pupa"),
  numInd = 10,
  stocha = 0.015,
  timeLayEggs = 1
)

devRate documentation built on Aug. 24, 2023, 9:07 a.m.