Nothing
categorySourcesPlot <- function(comp = NULL, ref = NULL, ctmatrix = NULL, analysis = "error", units = NULL, population = NULL,
fontSize = NULL, breaks = waiver(), labels = waiver(), limits = NULL){
ylab <- ifelse(is.null(ctmatrix), "Percentage of Domain",
ifelse(is.null(units), "units", units))
if(!is.null(comp) & !is.null(ref)){
ctmatrix <- crosstabm(comp, ref, percent = TRUE, population = NULL)
}
if(!is.null(ctmatrix)){
if(!is(ctmatrix, "matrix")) stop("ctmatrix must be of class matrix")
if(!is.null(population)) ctmatrix <- sample2pop(ctmatrix, population)
resT <- data.frame(Comission = comissionj(ctmatrix), Agreement = agreementj(ctmatrix),
Omission = omissionj(ctmatrix), Category = colnames(ctmatrix))
if(analysis == "change") colnames(resT)[1:3] <- c("Loss", "Persistence", "Gain")
rownames(resT) <- NULL
}
resT2 <- pivot_longer(resT, cols = 1:3, names_to = "differenceType", values_to = "value")
resT2$differenceType <- factor(resT2$differenceType, levels = c('Comission', 'Agreement', 'Omission'))
ggplot(data = resT2,
aes(x = .data$Category, y = .data$value, fill = .data$differenceType)) +
geom_bar(colour = "black", stat = "identity") +
labs(x = "Category", y = ylab, fill = '') +
theme_classic() +
scale_y_continuous(expand = c(0, 0), breaks = breaks, labels = labels, limits = limits) +
theme(legend.position = "top") +
coord_flip() +
guides(fill = guide_legend(reverse = TRUE)) +
scale_fill_manual(values = c(Comission = "#aeaeae", Agreement = "#4d4d4d", Omission = "#e6e6e6")) +
theme(text = element_text(size = fontSize))
}
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