disclapmix: Discrete Laplace Mixture Inference using the EM Algorithm

Make inference in a mixture of discrete Laplace distributions using the EM algorithm. This can e.g. be used for modelling the distribution of Y chromosomal haplotypes as described in [1, 2] (refer to the URL section).

Author
Mikkel Meyer Andersen and Poul Svante Eriksen
Date of publication
2015-09-09 15:40:33
Maintainer
Mikkel Meyer Andersen <mikl@math.aau.dk>
License
GPL-2
Version
1.6.2
URLs

View on CRAN

Man pages

clusterdist
Calculate distance between clusters
clusterprob
Cluster origin probabilities for haplotypes
contributor_pairs
Contributor pairs from a 2 person mixture
danes
Y-STR haplotypes
disclapmix
Discrete Laplace mixture inference using the EM algorithm
disclapmixfit
Discrete Laplace mixture fit by the EM algorithm
disclapmix-package
Discrete Laplace mixture inference using the EM algorithm
generate_mixture
Generate a mixture
plot.disclapmixfit
Plot a disclapmixfit
predict.disclapmixfit
Predict from a disclapmixfit
print.disclapmixfit
Print a disclapmixfit
rank_contributor_pairs
Separate a 2 person mixture
simulate.disclapmixfit
Simulate from a disclapmixfit
summary.disclapmixfit
Summary of a disclapmixfit

Files in this package

disclapmix
disclapmix/src
disclapmix/src/Makevars
disclapmix/src/helper.cpp
disclapmix/src/disclapfamily.cpp
disclapmix/src/happrobsum.cpp
disclapmix/src/Makevars.win
disclapmix/src/RcppExports.cpp
disclapmix/NAMESPACE
disclapmix/demo
disclapmix/demo/00Index
disclapmix/demo/danes.R
disclapmix/NEWS
disclapmix/data
disclapmix/data/danes.txt.gz
disclapmix/R
disclapmix/R/mixture.R
disclapmix/R/disclapmix.R
disclapmix/R/clusterdist.R
disclapmix/R/RcppExports.R
disclapmix/R/clusterprob.R
disclapmix/R/proto_functions.R
disclapmix/R/helper.R
disclapmix/MD5
disclapmix/DESCRIPTION
disclapmix/man
disclapmix/man/disclapmix-package.Rd
disclapmix/man/disclapmixfit.Rd
disclapmix/man/clusterprob.Rd
disclapmix/man/rank_contributor_pairs.Rd
disclapmix/man/disclapmix.Rd
disclapmix/man/danes.Rd
disclapmix/man/summary.disclapmixfit.Rd
disclapmix/man/print.disclapmixfit.Rd
disclapmix/man/plot.disclapmixfit.Rd
disclapmix/man/simulate.disclapmixfit.Rd
disclapmix/man/contributor_pairs.Rd
disclapmix/man/generate_mixture.Rd
disclapmix/man/predict.disclapmixfit.Rd
disclapmix/man/clusterdist.Rd