dlnm: Distributed Lag Non-Linear Models
Version 2.3.2

Collection of functions for distributed lag linear and non-linear models.

Browse man pages Browse package API and functions Browse package files

AuthorAntonio Gasparrini [aut, cre], Ben Armstrong [aut], Fabian Scheipl [ctb]
Date of publication2017-01-16 14:15:57
MaintainerAntonio Gasparrini <antonio.gasparrini@lshtm.ac.uk>
LicenseGPL (>= 2)
Version2.3.2
URL https://github.com/gasparrini/dlnm http://www.ag-myresearch.com/package-dlnm
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("dlnm")

Man pages

cbPen: Generate Penalty Matrices for a DLNM
chicagoNMMAPS: Daily Mortality Weather and Pollution Data for Chicago
coef.crosspred: Model Coefficients and their (Co)Variance Matrix of a DLNM
cr: Generate a Basis Matrix for Penalized Cubic Regression...
crossbasis: Generate a Cross-Basis Matrix for a DLNM
crosspred: Generate Predictions for a DLNM
crossreduce: Reduce the Fit of a DLNM to One-Dimensional Summaries
dlnm-internal: Internal Functions for Package dlnm
dlnm-package: Distributed Lag Non-linear Models (DLNM)
drug: A Trial on the Effect of Time-Varying Doses of a Drug
equalknots: Define Knots at Equally-Spaced Values
exphist: Define Exposure Histories from an Exposure Profile
integer: Generate a Basis Matrix of Indicator Variables for Integer...
lin: Generate a Basis Matrix with a Variable as Linear
logknots: Define Knots for Lag Space at Equally-Spaced Log-Values
nested: Nested Case-Control Study with a Time-Varying Exposure and a...
onebasis: Generate a Basis Matrix for Different Functions
plot.crosspred: Plot Predictions for a DLNM
plot.crossreduce: Plot Predictions for a Reduced DLNM
poly: Generate a Basis Matrix of Polynomials
ps: Generate a Basis Matrix for P-Splines
smooth.construct.cb.smooth.spec: Cross-Basis Spline Smooths for a DLNM
strata: Generate a Basis Matrix of Indicator Variables
thr: Generate a Basis Matrix of Linear Threshold Transformations

Functions

Predict.matrix.cb.smooth Man page Source code
cbPen Man page Source code
checkcrossbasis Source code
checkgroup Source code
checkonebasis Source code
chicagoNMMAPS Man page
coef.crosspred Man page Source code
coef.crossreduce Man page Source code
cr Man page Source code
crossbasis Man page Source code
crossplot Man page
crosspred Man page Source code
crossreduce Man page Source code
dlnm Man page
dlnm-package Man page
drug Man page
equalknots Man page Source code
exphist Man page Source code
fci Man page Source code
findrank Man page Source code
getcoef Man page Source code
getlink Man page Source code
getvcov Man page Source code
integer Man page
lin Man page Source code
lines.crosspred Man page Source code
lines.crossreduce Man page Source code
logknots Man page Source code
mkXpred Man page Source code
mkaddSlag Man page Source code
mkat Man page Source code
mkbasis Man page
mkcen Man page Source code
mklag Man page Source code
mklagbasis Man page
nested Man page
onAttach Source code
onebasis Man page Source code
plot.crosspred Man page Source code
plot.crossreduce Man page Source code
points.crosspred Man page Source code
points.crossreduce Man page Source code
poly Man page Source code
ps Man page Source code
seqlag Man page Source code
smooth.construct.cb.smooth.spec Man page Source code
strata Man page Source code
summary.crossbasis Man page Source code
summary.crosspred Man page Source code
summary.crossreduce Man page Source code
summary.onebasis Man page Source code
thr Man page Source code
vcov.crosspred Man page Source code
vcov.crossreduce Man page Source code

Files

inst
inst/Changesince200
inst/CITATION
inst/Changesince151
inst/NEWS
inst/Changesince220
inst/doc
inst/doc/dlnmPenalized.pdf
inst/doc/dlnmOverview.pdf
inst/doc/dlnmExtended.pdf
inst/doc/dlnmExtended.R
inst/doc/dlnmTS.Rnw
inst/doc/dlnmTS.R
inst/doc/dlnmTS.pdf
inst/doc/dlnmOverview.R
inst/doc/dlnmPenalized.Rnw
inst/doc/dlnmOverview.Rnw
inst/doc/dlnmPenalized.R
inst/doc/dlnmExtended.Rnw
NAMESPACE
NEWS.md
data
data/nested.rda
data/chicagoNMMAPS.rda
data/drug.rda
R
R/poly.R
R/coef.crosspred.R
R/exphist.R
R/getlink.R
R/integer.R
R/mkaddSlag.R
R/lines.crosspred.R
R/coef.crossreduce.R
R/cr.R
R/onAttach.R
R/mkXpred.R
R/checkcrossbasis.R
R/ps.R
R/points.crossreduce.R
R/equalknots.R
R/strata.R
R/vcov.crossreduce.R
R/checkgroup.R
R/vcov.crosspred.R
R/Predict.matrix.cb.smooth.R
R/summary.crossbasis.R
R/logknots.R
R/summary.crosspred.R
R/onebasis.R
R/findrank.R
R/fci.R
R/lin.R
R/points.crosspred.R
R/crosspred.R
R/crossreduce.R
R/smooth.construct.cb.smooth.spec.R
R/plot.crossreduce.R
R/crossbasis.R
R/summary.crossreduce.R
R/thr.R
R/seqlag.R
R/getcoef.R
R/checkonebasis.R
R/getvcov.R
R/mkat.R
R/plot.crosspred.R
R/cbPen.R
R/lines.crossreduce.R
R/mklag.R
R/mkcen.R
R/summary.onebasis.R
vignettes
vignettes/biblioVignette.bib
vignettes/dlnmTS.Rnw
vignettes/dlnmPenalized.Rnw
vignettes/dlnmOverview.Rnw
vignettes/dlnmExtended.Rnw
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/cr.Rd
man/plot.crosspred.Rd
man/equalknots.Rd
man/plot.crossreduce.Rd
man/crossbasis.Rd
man/integer.Rd
man/chicagoNMMAPS.Rd
man/ps.Rd
man/nested.Rd
man/onebasis.Rd
man/crosspred.Rd
man/dlnm-internal.Rd
man/strata.Rd
man/poly.Rd
man/crossreduce.Rd
man/exphist.Rd
man/thr.Rd
man/drug.Rd
man/smooth.construct.cb.smooth.spec.Rd
man/coef.crosspred.Rd
man/cbPen.Rd
man/logknots.Rd
man/lin.Rd
man/dlnm-package.Rd
dlnm documentation built on May 20, 2017, 12:43 a.m.