dpseg: Piecewise Linear Segmentation by Dynamic Programming

Piecewise linear segmentation of ordered data by a dynamic programming algorithm. The algorithm was developed for time series data, e.g. growth curves, and for genome-wide read-count data from next generation sequencing, but is broadly applicable. Generic implementations of dynamic programming routines allow to scan for optimal segmentation parameters and test custom segmentation criteria ("scoring functions").

Package details

AuthorRainer Machne [aut, cre] (<https://orcid.org/0000-0002-1274-5099>), Peter F. Stadler [aut]
MaintainerRainer Machne <machne@hhu.de>
LicenseGPL (>= 2)
URL https://gitlab.com/raim/dpseg/
Package repositoryView on CRAN
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dpseg documentation built on Aug. 17, 2020, 5:06 p.m.