Description Usage Arguments Examples
Main function to calculate stability coefficients
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formula |
a formula, weight a response to left of ~. |
data |
Data frame to run models on |
methods |
Which tree methods to use. Defaults: lm, rpart, tree, ctree, evtree. Also can use "rf" for random forests |
samp.method |
Sampling method. Refer to caret package trainControl() documentation. Default is repeated cross-validation. Other options include "cv" and "boot". |
tuneLength |
Number of tuning parameters to try. Applies to train() |
n.rep |
Number of times to replicate each method |
bump.rep |
Number of repetitions for bumping |
parallel |
Whether to run all reps in parallel |
ncore |
Number of cores to use |
roundVal |
How much to round cut points when calculating stability |
stablelearner |
Whether or not to use the stablelearner package to calculate stability |
subset |
Whether to subset |
perc.sub |
What fraction of data to put into train dataset. 1-frac.sub is allocated to test dataset. Defaults to 0.75 |
weights |
Optional weights for each case. |
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