| simulateMTLNR | R Documentation |
Simulates the decision responses and reaction times together with a
discrete confidence judgment in the MTLNR (Reynolds et al., 2020),
given specific parameter constellations.
See dMTLNR for more information about parameters.
Also computes the Gamma rank correlation between the confidence ratings and condition
(task difficulty), reaction times and accuracy in the simulated output.
Basically, this function is a wrapper for rMTLNR
for application in confidence experiments with manipulation of specific parameters.
simulateMTLNR(paramDf, n = 10000, gamma = FALSE, agg_simus = FALSE,
stimulus = c(1, 2), seed = NULL)
paramDf |
a list or data frame with one row. Column names should
match the following names (see dMTLNR):
For different stimulus quality/mean
drift rates, names should be |
n |
integer. The number of samples (per condition and stimulus direction) generated.
Total number of samples is |
gamma |
logical. If TRUE, the gamma correlation between confidence ratings, rt and accuracy is computed. |
agg_simus |
logical. Simulation is done on a trial basis with RTs outcome. If TRUE, the simulations will be aggregated over RTs to return only the distribution of response and confidence ratings. Default: FALSE. |
stimulus |
numeric vector. Either 1, 2 or c(1,2) (default). Together with condition represents the experimental situation. In a binary decision task the presented stimulus belongs to one of two categories. In the default setting trials with both categories presented are simulated but one can choose to simulate only trials with the stimulus coming from one category (1 for the category that is associated with positive drift in the decision process where 1 responses are considered correct and 2 correspondingly for negative drifts and 2 correct decisions). |
seed |
numerical. Seeding for non-random data generation. |
Simulation is done by simulating normally distributed logarithms of boundary crossing times for both accumulators based on the MTLNR model. The smaller time determines decision time and response (i.e. the winning accumulator). The confidence variable is computed based on the log-ratio of the loosing boundary crossing time over the winning boundary crossing time.
The confidence values are then binned according to the given thresholds.
The output of the fitting function fitRTConf with the respective model
fits the argument paramDf for simulation.
The Gamma coefficients are computed separately for correct/incorrect responses for the
correlation of confidence ratings with condition and rt and separately for conditions
for the correlation of accuracy and confidence. The
resulting data frames in the output thus have two columns. One for the grouping variable
and one for the Gamma coefficient.
Depending on gamma and agg_simus.
If gamma is FALSE, returns a data.frame with columns: condition,
stimulus, response, correct, rt, conf (the continuous confidence
measure) and rating (the discrete confidence rating), and dec and vis
(only if process_results=TRUE) for the final states of accumulators in the
simulation or
(if agg_simus=TRUE): condition, stimulus,response, correct,
rating and p (for the probability of a response and rating, given
the condition and stimulus).
If gamma is TRUE, returns a list with elements:
simus (the simulated data frame) and gamma, which is again a list with elements
condition, rt and correct, each a tibble with two columns (see details for more
information).
Different parameters for different conditions are only allowed for drift rate,
v.
All other parameters are used for all conditions.
Sebastian Hellmann.
Reynolds, A., Kvam, P. D., Osth, A. F., & Heathcote, A. (2020). Correlated racing evidence accumulator models. Journal of Mathematical Psychology, 96, 102331. doi: doi: 10.1016/j.jmp.2020.102331
# 1. Define some parameter set in a data.frame
paramDf <- data.frame(v1=0.5, v2=1.0, t0=0.1, st0=0,
mu_d1=1, mu_d2=1,
s1=0.5, s2=0.5, rho=0.2,
theta1=0.8, theta2=1.5)
# 2. Simulate trials for both stimulus categories and all conditions (2)
simus <- simulateMTLNR(paramDf)
head(simus)
library(ggplot2)
simus <- simus[simus$response != 0, ]
simus$rating <- factor(simus$rating, labels = c("unsure", "medium", "sure"))
ggplot(simus, aes(x = rt, group = interaction(correct, rating),
color = as.factor(correct), linetype = rating)) +
geom_density(linewidth = 1.2, na.rm=TRUE) + xlim(c(0, 5)) +
facet_grid(rows = vars(condition), labeller = "label_both")
# automatically aggregate simulation distribution
# to get only accuracy x confidence rating distribution for
# all conditions
agg_simus <- simulateMTLNR(paramDf, agg_simus = TRUE)
head(agg_simus)
agg_simus$rating <- factor(agg_simus$rating, labels = c("unsure", "medium", "sure"))
library(ggplot2)
ggplot(agg_simus, aes(x = rating, group = correct, fill = as.factor(correct), y = p)) +
geom_bar(stat = "identity", position = "dodge") +
facet_grid(cols = vars(condition), labeller = "label_both")
# Compute Gamma correlation coefficients between
# confidence and other behavioral measures
# output will be a list
simu_list <- simulateMTLNR(paramDf, n = 400, gamma = TRUE)
simu_list
# Example with asymmetric confidence thresholds
paramDf_asym <- data.frame(v1=0.5, v2=1.0, t0=0.1, st0=0,
mu_d1=1, mu_d2=1,
s1=0.5, s2=0.5, rho=0.2,
thetaLower1=0.5, thetaLower2=1.2,
thetaUpper1=0.7, thetaUpper2=1.8)
simus_asym <- simulateMTLNR(paramDf_asym, n = 1000)
head(simus_asym)
# Example with multiple conditions
paramDf_multi <- data.frame(v1=0.3, v2=0.6, v3=1.2, t0=0.1, st0=0,
mu_d1=1, mu_d2=1,
s1=0.5, s2=0.5, rho=0.2,
theta1=0.8, theta2=1.5)
simus_multi <- simulateMTLNR(paramDf_multi, n = 1000)
table(simus_multi$condition, simus_multi$correct)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.