dynaTree: Dynamic Trees for Learning and Design
Version 1.2-10

Inference by sequential Monte Carlo for dynamic tree regression and classification models with hooks provided for sequential design and optimization, fully online learning with drift, variable selection, and sensitivity analysis of inputs. Illustrative examples from the original dynamic trees paper are facilitated by demos in the package; see demo(package="dynaTree").

AuthorRobert B. Gramacy <rbgramacy@chicagobooth.edu>, Matt A. Taddy <taddy@chicagobooth.edu> and Christoforos Anagnostopoulos <christoforos.anagnostopoulos06@imperial.ac.uk>
Date of publication2017-03-15 14:54:54
MaintainerRobert B. Gramacy <rbg@vt.edu>
LicenseLGPL
Version1.2-10
URL http://bobby.gramacy.com/r_packages/dynaTree/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("dynaTree")

Getting started

Package overview

Popular man pages

dynaTree-internal: Internal dynaTree Functions
dynaTree-package: Dynamic trees for learning and design
getBF: Extract a Path of (log) Bayes Factors
predict.dynaTree: Prediction for Dynamic Tree Models
relevance.dynaTree: Calculate relevance statistics for input coordinates
retire.dynaTree: Retire (i.e. remove) data from the a dynaTree model
update.dynaTree: Updating a Dynamic Tree Model With New Data
See all...

All man pages Function index File listing

Man pages

alcX.dynaTree: Calculate the ALC or predictive entropy statistic at the X...
deletecloud: Copy and Delete C-side Clouds in dynaTree Objects
dynaTree: Fitting Dynamic Tree Models
dynaTree-class: Class "dynaTree"
dynaTree-internal: Internal dynaTree Functions
dynaTree-package: Dynamic trees for learning and design
elec2: The ELEC2 Data Set
getBF: Extract a Path of (log) Bayes Factors
plot.dynaTree: Plotting Predictive Distributions of Dynamic Tree models
predict.dynaTree: Prediction for Dynamic Tree Models
rejuvenate.dynaTree: Rejuvenate particles from the dynaTree posterior
relevance.dynaTree: Calculate relevance statistics for input coordinates
retire.dynaTree: Retire (i.e. remove) data from the a dynaTree model
sens.dynaTree: Monte Carlo Sensitivity Analysis for dynaTree Models
update.dynaTree: Updating a Dynamic Tree Model With New Data
varpropuse: Calculate the proportion of variables used in tree splits,...

Functions

Files

src
src/matrix.c
src/Makevars
src/pall.c
src/rhelp.c
src/linalg.c
src/tree.cc
src/cloud.h
src/lh.c
src/tree.h
src/lh.h
src/rhelp.h
src/particle.cc
src/cloud.cc
src/linalg.h
src/particle.h
src/pall.h
src/init.c
src/dynaTree.cc
src/matrix.h
NAMESPACE
demo
demo/fried.R
demo/class2d.R
demo/elec2.R
demo/online.R
demo/design.R
demo/00Index
demo/reg1d.R
data
data/elec2.rda
R
R/000.R
R/plot.R
R/predict.R
R/dynaTree.R
MD5
DESCRIPTION
ChangeLog
man
man/retire.dynaTree.Rd
man/elec2.Rd
man/sens.dynaTree.Rd
man/relevance.dynaTree.Rd
man/rejuvenate.dynaTree.Rd
man/plot.dynaTree.Rd
man/update.dynaTree.Rd
man/varpropuse.Rd
man/getBF.Rd
man/deletecloud.Rd
man/dynaTree-internal.Rd
man/alcX.dynaTree.Rd
man/dynaTree.Rd
man/dynaTree-package.Rd
man/predict.dynaTree.Rd
man/dynaTree-class.Rd
dynaTree documentation built on May 19, 2017, 8:53 p.m.

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