LSD: Multiple comparisons, "Least significant difference" and...

In easynem: Nematode Community Analysis

Multiple comparisons, "Least significant difference" and Adjust P-values (single factor)

Description

The LSD() is used to perform "Least significant difference" for grouped data and create compare-class. This function is only applicable to single factor analysis, see LSD2 for a two factor version of the function.

Usage

LSD(data, .group, y, ...)

Arguments

data	An easynem-class data.
.group	Grouping variables.
y	Dependent variable (numeric data).
...	Other parameters for LSD.test.

Details

To facilitate code interpretation, It is recommended to use this function in conjunction with the calc_compare function:

nem_compare <- nem |> calc_compare(.group = con_crop, y = pH, method = LSD)

Value

An compare-class object.

See Also

Other functions related to differential analysis methods: TTest2, TTest, WilcoxTest2, WilcoxTest, KruskalTest2, KruskalTest, LSD2, HSD, HSD2.

Examples

nem <- read_nem2(tab = nemtab, tax = nemtax, meta = nemmeta)
nem_test <- nem |>
            calc_compare(.group = Treatments,
              y = Mesorhabditis,
              method = LSD)
nem_test

easynem documentation built on Nov. 5, 2025, 7:39 p.m.