eggCounts: Hierarchical Modelling of Faecal Egg Counts

An implementation of hierarchical models for faecal egg count data to assess anthelmintic efficacy. Bayesian inference is done via MCMC sampling using Stan.

Install the latest version of this package by entering the following in R:
install.packages("eggCounts")
AuthorCraig Wang [cre, aut], Michaela Paul [aut], Reinhard Furrer [ctb], Trustees of Columbia University [cph] (rstanarm)
Date of publication2017-01-25 10:23:13
MaintainerCraig Wang <craig.wang@uzh.ch>
LicenseGPL (>= 3)
Version1.3
http://www.math.uzh.ch/as/index.php?id=software_as

View on CRAN

Files

inst
inst/CITATION
inst/NEWS
inst/chunks
inst/chunks/gpl.txt
inst/chunks/license.stan
exec
exec/ziunpaired.stan
exec/unpaired.stan
exec/paired.stan
exec/zipaired.stan
exec/zinb.stan
exec/nb.stan
tests
tests/testthat
tests/testthat/test.R
src
src/Makevars
src/Makevars.win
src/Modules.cpp
src/include
src/include/models.hpp
NAMESPACE
demo
demo/fecm_stan.R
demo/00Index
data
data/echinococcus.csv.gz
data/tab1morgan.txt.gz
data/epgs.txt.gz
R
R/fecr_models_stan.R R/printSummary.R R/fecr_stan.R R/fec_stan.R R/simData.R R/profile.R R/stanmodels.R R/waavpMethods.R R/stan2mcmc.R R/fecr_probability.R R/zzz.R R/fec_models_stan.R
MD5
DESCRIPTION
man
man/fec_stan.Rd man/simData2s.Rd man/epgs.Rd man/fecrtCI.Rd man/simData1s.Rd man/fecr_probability.Rd man/echinococcus.Rd man/tab1morgan.Rd man/fecr_stan.Rd man/eggCounts-package.Rd man/stan2mcmc.Rd
cleanup
tools
tools/make_cpp.R
cleanup.win

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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