Hierarchical Modelling of Faecal Egg Counts

eggCounts-package | Hierarchical modelling of faecal egg counts |

epgs | Faecal egg count samples (before and after treatment) |

fecr_probability | Compute probability of the reduction parameter relative to a... |

fecr_stan | Model the reduction of faecal egg count |

fecr_stanExtra | Model the reduction of faecal egg count using custom models |

fecr_stanSimple | Model the reduction of faecal egg count using a simple... |

fecrtCI | Compute standard FECRT according to WAAVP guidelines |

fec_stan | Modelling of faecal egg count data (one-sample case) |

getPrior_delta | Get prior parameters from Beta distribution |

getPrior_mu | Get prior parameters from Gamma distribution |

plotCounts | Plot faecal egg count data |

simData1s | Simulate faecal egg count data (1-sample situation) |

simData2s | Simulate faecal egg count data (2-sample situation) |

stan2mcmc | Convert a Stanfit object to a MCMC object |

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