CARD_taxonomy: CARD 3.1.4 and 1.1.3 aro_index hand curated and combine
In epi2me2r: Process Nanopore EPI2ME Output for Use in R
CARD_taxonomy R Documentation
CARD 3.1.4 and 1.1.3 aro_index hand curated and combine
Description
A dataset with information on CARD genes in the 3.1.4 and 1.13 data releases
The variables are as follows:
Usage
data(CARD_taxonomy)
Format
A data frame with 3385 rows and 13 variables
Details
ARO Accession. ARO Accession (3000005–3005385)
CARDversion. If the data came from 3.1.4 or 1.1.3
(3.1.3, hand-added 1.1.3)
CVTERMID. CV TERM ID (36014–43745)
Model Sequence ID.
Model ID.
Model Name.
ARO Name.
Protein Accession.
DNA Accession.
AMR Gene Family.
Drug Class.
Resistance Mechanism.
mutation-associated. if the gene is mutation associated
Source
epi2me2r documentation built on June 3, 2022, 9:07 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| CARD_taxonomy | R Documentation |
CARD 3.1.4 and 1.1.3 aro_index hand curated and combine
Description
A dataset with information on CARD genes in the 3.1.4 and 1.13 data releases The variables are as follows:
Usage
data(CARD_taxonomy)
Format
A data frame with 3385 rows and 13 variables
Details
ARO Accession. ARO Accession (3000005–3005385)
CARDversion. If the data came from 3.1.4 or 1.1.3 (3.1.3, hand-added 1.1.3)
CVTERMID. CV TERM ID (36014–43745)
Model Sequence ID.
Model ID.
Model Name.
ARO Name.
Protein Accession.
DNA Accession.
AMR Gene Family.
Drug Class.
Resistance Mechanism.
mutation-associated. if the gene is mutation associated
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.