| ModelSIRD | R Documentation |
SIRD model
ModelSIRD(name, prevalence, transmission_rate, recovery_rate, death_rate)
name |
String. Name of the virus |
prevalence |
Double. Initial proportion of individuals with the virus. |
transmission_rate |
Numeric scalar between 0 and 1. Virus's rate of infection. |
recovery_rate |
Numeric scalar between 0 and 1. Rate of recovery_rate from virus. |
death_rate |
Numeric scalar between 0 and 1. Rate of death from virus. |
The initial_states function allows the user to set the initial state of the model. The user must provide a vector of proportions indicating the following values: (1) proportion of non-infected agents already removed, and (2) proportion of non-ifected agents already deceased.
The ModelSIRD function returns a model of class epiworld_model.
epiworld-methods
Other Models:
ModelDiffNet(),
ModelMeaslesQuarantine(),
ModelSEIR(),
ModelSEIRCONN(),
ModelSEIRD(),
ModelSEIRDCONN(),
ModelSEIRMixing(),
ModelSIR(),
ModelSIRCONN(),
ModelSIRDCONN(),
ModelSIRLogit(),
ModelSIRMixing(),
ModelSIS(),
ModelSISD(),
ModelSURV(),
epiworld-data
model_sird <- ModelSIRD(
name = "COVID-19",
prevalence = 0.01,
transmission_rate = 0.9,
recovery_rate = 0.1,
death_rate = 0.01
)
# Adding a small world population
agents_smallworld(
model_sird,
n = 1000,
k = 5,
d = FALSE,
p = .01
)
# Running and printing
run(model_sird, ndays = 100, seed = 1912)
model_sird
# Plotting
plot(model_sird)
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