View source: R/annotations_by_id.R
epmc_annotations_by_id | R Documentation |
Retrieve text-mined annotations contained in abstracts and open access full-text articles.
epmc_annotations_by_id(ids = NULL)
ids, |
character vector with publication identifiers following the structure "source:ext_id", e.g. '"MED:28585529"' |
returns text-mined annotations in a tidy format with the following variables
Publication data source
Article Identifier
PMCID that locates full-text in Pubmed Central
Text snipped found before the annotation
Annotated entity
Text snipped found after the annotation
Targeted entity
Uniform link dictionary entry for targeted entity
URL to full-text occurence of the annotation
Type of annotation like Chemicals
Article section mentioning the annotation like Methods
Annotation data provider
Sub-data provider
## Not run:
annotations_by_id("MED:28585529")
# multiple ids
annotations_by_id(c("MED:28585529", "PMC:PMC1664601"))
## End(Not run)
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