spatialanimation: Function for ploting simulation as a gif

In facilitation: A C++ Framework for Plant-Plant Interaction IBMs

Description

The spatialanimation function plots the individuals of the selected stages over time. Use plotsnapshot for plotting a single instant.

Usage

spatialanimation(data, times = seq(0, data$maxtime, length.out = 50),
  interval = 0.1, draw = data$num.total:1,
  radius = data$param$radius[draw], color = colorRampPalette(c("darkred",
  "lightgreen"))(length(draw)), movie.name = "facilitationmovie.gif",
  xlim = c(0, data$w), ylim = c(0, data$h))

plotsnapshot(data, t, ...)

Arguments

data	result of a simulation, created by community
times	array of times at which to plot
interval	a time length to wait between frames
draw	an array of stages id, to be drawn bottom to top. Absent stages will not be drawn.
radius	Optional. Array representing the sizes in which the individuals will be drawn. Defaults to interaction radius.
color	Optional. A color vector
movie.name	The filename of the gif that will be saved.
xlim	Optional. Limits to the x-axis
ylim	Optional. Limits to the y-axis
t	a single time at which to plot
...	additional parameters to be passed to spatialanimation

Author(s)

Alexandre Adalardo de Oliveira - 16/03/2016

M. Salles

Examples

data(twospecies)
spatialanimation(twospecies,draw=c(5,3),times=seq(0,10,1),movie.name="ts.gif")
data(twospecies)
plotsnapshot(twospecies,t=10)

facilitation documentation built on May 2, 2019, 5:54 a.m.