calculate_daily_metabolism: Calculate daily metabolic processes (Low-level)

In fb4package: 'Fish Bioenergetics 4.0' Model Implementation with High-Performance 'TMB' Backend

Calculate daily metabolic processes (Low-level)

Description

Calculates egestion, excretion, respiration, and SDA for a single day. Uses existing mid-level functions from other modules.

Usage

calculate_daily_metabolism(
  consumption_energy,
  current_weight,
  temperature,
  effective_p,
  processed_species_params,
  diet_proportions = NULL,
  indigestible_fractions = NULL,
  oxycal = 13560
)

Arguments

consumption_energy	Energy consumption (J/g fish/day)
current_weight	Current weight (g)
temperature	Temperature (°C)
effective_p	Effective p_value for the day
processed_species_params	All processed species parameters
diet_proportions	Diet proportions for the day
indigestible_fractions	Indigestible fractions for the day
oxycal	Oxycalorific coefficient (J/g O2)

Value

List with all metabolic fluxes

fb4package documentation built on May 8, 2026, 1:07 a.m.