explore_trace: Plot the trace the search progression

In ferrn: Facilitate Exploration of touRR optimisatioN

Plot the trace the search progression

Description

Trace the index value of search/ interpolation points in guided tour optimisation

Usage

explore_trace_interp(
  dt,
  iter = NULL,
  color = NULL,
  group = NULL,
  cutoff = 50,
  target_size = 3,
  interp_size = 1,
  accuracy_x = 5,
  accuracy_y = 0.01
)

Arguments

dt	a data object collected by the projection pursuit guided tour optimisation in tourr
iter	the variable to be plotted on the x-axis
color	the variable to be coloured by
group	the variable to label different runs of the optimiser(s)
cutoff	numeric; if the number of interpolating points is smaller than cutoff, all the interpolation points will be plotted as dots
target_size	numeric; the size of target points in the interpolation
interp_size	numeric; the size of interpolation points
accuracy_x	numeric; If the difference of two neighbour x-labels is smaller than accuracy_x, only one of them will be displayed. Used for better axis label
accuracy_y	numeric; the precision of y-axis label

Value

a ggplot object for diagnosing how the index value progresses during the interpolation

See Also

Other main plot functions: explore_space_pca(), explore_space_tour(), explore_trace_search()

Examples

# Compare the trace of interpolated points in two algorithms
holes_1d_better %>%
  explore_trace_interp(interp_size = 2) +
  scale_color_continuous_botanical(palette = "fern")

ferrn documentation built on Aug. 6, 2022, 5:08 p.m.