extract_fit: Extract model output to dataframe

In finalfit: Quickly Create Elegant Regression Results Tables and Plots when Modelling

Extract model output to dataframe

Description

Internal function, not usually called directly.

Internal function, not called directly.

Internal function, not called directly.

Usage

extract_fit(...)

## S3 method for class 'glm'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "OR",
  estimate_suffix = "",
  p_name = "p",
  exp = TRUE,
  confint_type = "profile",
  confint_level = 0.95,
  ...
)

## S3 method for class 'glmerMod'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "OR",
  estimate_suffix = "",
  p_name = "p",
  exp = TRUE,
  confint_type = "Wald",
  confint_level = 0.95,
  ...
)

## S3 method for class 'lm'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "Coefficient",
  estimate_suffix = "",
  p_name = "p",
  confint_level = 0.95,
  ...
)

## S3 method for class 'lmerMod'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "OR",
  estimate_suffix = "",
  p_name = "p",
  confint_type = "Wald",
  confint_level = 0.95,
  ...
)

## S3 method for class 'coxph'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "HR",
  estimate_suffix = "",
  p_name = "p",
  ...
)

## S3 method for class 'crr'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "HR",
  estimate_suffix = "",
  p_name = "p",
  ...
)

## S3 method for class 'coxme'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "HR",
  estimate_suffix = "",
  p_name = "p",
  confint_level = 0.95,
  ...
)

## S3 method for class 'stanfit'
extract_fit(
  .data,
  explanatory_name = "explanatory",
  estimate_name = "OR",
  estimate_suffix = "",
  p_name = "p",
  digits = c(2, 2, 3),
  X,
  ...
)

Arguments

...	Other arguments.
.data	Model output.
explanatory_name	Name for this column in output.
estimate_name	Name for this column in output.
estimate_suffix	Appeneded to estimate name.
p_name	Name given to p-value estimate
confint_type	One of c("profile", "default") for GLM models or c("profile", "Wald", "boot") for glmer/lmer models. Not implemented for lm, coxph or coxphlist.
confint_level	The confidence level required.
X	Design matrix from Stan modelling procedure.

finalfit documentation built on Sept. 11, 2024, 9:01 p.m.