Contains data for set of 384 SNP markers from Illumina GoldenGate arrays of 224 tetraploid potato varieties covering a wide range with respect to geographic origin, year of first registration and intended application.
A data frame with 86016 observations on the following 6 variables.
a factor with levels
a factor with 224 levels
a numeric vector, raw intensity of first channel
a numeric vector, raw intensity of second channel
a numeric vector, angle in (2/pi)*radials and first polar coordinate, obtained from GenomeStudio
a numeric vector, radius and second polar coordinate, obtained from GenomeStudio
Described in Anithakumari AM, J Tang, HJ van Eck, RFG Visser, JAM Leunissen, B Vosman, CG van der Linden (2010). A pipeline for high throughput detection and mapping of SNPs from EST databases. Mol. Breeding 26: 65-75
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