Files in fitode

Tools for Ordinary Differential Equations Model Fitting

README.md R/fitode-class.R R/prior.R R/utilities.R R/transform.R R/fitodeMCMC.R R/model.R R/data.R R/simulate.R R/generic.R R/loglik.R R/plot.R R/update.R R/solution.R R/fitodeMCMC-methods.R R/zzz.R R/fitode-methods.R R/wmvrnorm.R R/fitode.R inst/doc/fitode.pdf inst/doc/fitode.R tests/testthat.R tests/testthat/test-methods.R tests/testthat/test-logLik.R tests/testthat/test-sensitivityLik.R tests/testthat/test-sensitivity.R tests/testthat/test-ols.R tests/testthat/test-prior.R man/show-odemodel-method.Rd man/select_model.Rd man/vcov-fitodeMCMC-method.Rd man/Transform-odemodel-method.Rd man/ode.sensitivity.Rd man/logLik.sensitivity.Rd man/plot_internal.Rd man/apply_link.Rd man/grad.Rd man/select_prior.Rd man/update-fitode-method.Rd man/Transform-prior.ode-method.Rd man/stdEr-fitode-method.Rd man/loglik.ode-class.Rd man/solution.de-class.Rd man/simulate-odemodel-method.Rd man/jacobian-odemodel-method.Rd man/tumorgrowth.Rd man/fixpar.Rd man/coef-fitodeMCMC-method.Rd man/check_link.Rd man/jacobian.Rd man/summary-fitode-method.Rd man/summary-fitodeMCMC-method.Rd man/confint-fitode-method.Rd man/fitodeMCMC-class.Rd man/initialize-prior.ode-method.Rd man/stdEr-fitodeMCMC-method.Rd man/fitodeMCMC.Rd man/initialize-solution.ode-method.Rd man/plot-fitode-missing-method.Rd man/SierraLeone2014.Rd man/prior.ode-class.Rd man/update-fitodeMCMC-method.Rd man/initialize-odemodel-method.Rd man/Eval-loglik.ode-method.Rd man/initialize-loglik.ode-method.Rd man/set_link.Rd man/predict-fitode-method.Rd man/coef-fitode-method.Rd man/simulate-fitode-method.Rd man/make_prior.Rd man/blowfly.Rd man/logLik-fitode-method.Rd man/simulate_internal.Rd man/odemodel-class.Rd man/show-fitode-method.Rd man/plot-fitodeMCMC-missing-method.Rd man/Transform-loglik.ode-method.Rd man/hessian.Rd man/grad-loglik.ode-method.Rd man/Eval.Rd man/fitode.Rd man/grad-odemodel-method.Rd man/dfun.Rd man/vcov-fitode-method.Rd man/predict-fitodeMCMC-method.Rd man/dfun2.Rd man/ode.solve.Rd man/confint-fitodeMCMC-method.Rd man/show-fitodeMCMC-method.Rd man/profile-fitode-method.Rd man/fitode-class.Rd man/Transform.Rd