flip.object-class: Class flip.object

In flip: Multivariate Permutation Tests

Class flip.object

Description

The class flip.object is the output of a call to flip, flipMix, npc, flip.adjust etc. The following are functions to extract and manipulate relevant information from a flip.object.

Usage

## S4 method for signature 'flip.object'
show(object)

summary(object, ...)

## S4 method for signature 'flip.object'
summary(object, star.signif = TRUE, only.p.leq = NULL, ...)

## S4 method for signature 'flip.object'
dim(x)

## S4 method for signature 'flip.object'
x[i]

## S4 method for signature 'flip.object'
x[[i]]

## S4 method for signature 'flip.object'
length(x)

## S4 method for signature 'flip.object'
names(x)

## S4 replacement method for signature 'flip.object'
names(x) <- value

## S4 method for signature 'flip.object'
sort(x, decreasing = FALSE)

## S4 method for signature 'flip.object'
hist(x, ...)

## S4 method for signature 'flip.object'
plot(x, y, ...)

Arguments

object	a flip-object
...	additional arguments to be passed
star.signif	If TRUE (default), it puts stars on the significant tests
only.p.leq	Shows only tests with a p-value lower than only.p.leq. The default NULL is equivalent to set only.p.leq=1.
x	a flip.object.
i	indices specifying elements to extract or replace. Indices are numeric, character or logical vectors or empty (missing) or NULL.
value	character vector of up to the same length as x, or NULL.
decreasing	logical. Should the sort be increasing or decreasing?
y	not used.

Examples

Y=matrix(rnorm(50),10,5)
colnames(Y)=LETTERS[1:5]
Y[,1:2]=Y[,1:2] +2
res = flip(Y)
res
summary(res)
sort(res)
names(res)
length(res)
dim(res)
res=res[2:3]
res
hist(res)
plot(res)

flip documentation built on June 10, 2025, 9:13 a.m.