flux: Flux rate calculation from dynamic closed chamber measurements

Functions for the calculation of greenhouse gas flux rates from closed chamber concentration measurements. The package follows a modular concept: Fluxes can be calculated in just two simple steps or in several steps if more control in details is wanted. Additionally plot and preparation functions as well as functions for modelling gpp and reco are provided.

Install the latest version of this package by entering the following in R:
AuthorGerald Jurasinski, Franziska Koebsch, Anke Guenther, Sascha Beetz
Date of publication2014-04-25 11:02:53
MaintainerGerald Jurasinski <gerald.jurasinski@uni-rostock.de>

View on CRAN

Man pages

amc: Climate station data from 2009 to 2011 in the Ahlenmoor peat...

amd: Closed chamber fluxes from 2009 to 2011 in the Ahlenmoor peat...

append.df: Append a data.frame to another including consistency checks

auc: Calculate the area under a line(curve).

budget.ie: Estimate interpolation errors for GPP and Reco budgets

budget.reco: Predict fluxes from GPP and Reco models and prepare for...

checkm: Bring modelled and measured values together based on...

chop: Prepare data for flux rate estimation with 'flux' or GPP/Reco...

export: simple export wrapper

flux: Estimate gas flux rates using non-steady-state closed chamber...

flux.calib: Determine calibration measurement ranges according to the...

flux-internal: Internal functions of the package flux that are usually not...

flux-package: Flux rate estimation with dynamic closed chamber data

fluxx: Estimate (ghg) flux rates from online dynamic closed chamber...

gflux: Calculate gas flux rate from two concentrations

gpp: Model GPP from CO2 closed chamber flux data

inspect: Inspect and alter prepared ghg concentration data

lips: Linear interpolation between data points similar to approx.

modjust: Adjust Reco models

plot.fluss: Functions for bulk plotting of concentration change with time...

plot.gpp: Plot diagnostic plots for GPP (NEE) models derived with reco...

plot.reco: Plot diagnostic plots for Reco models.

reco: Model R_eco from CO2 exchange closed chamber data.

reco.bulk: Bulk fitting of Reco and GPP models

round.POSIXlt: Round times.

tbl8: Extract the relevant data of a bulk model object to a...

tt.nee: Medium frequency concentration data and fluxes from...

tt.pre: One day data from closed chamber measurements in the...


amc Man page
amd Man page
append.df Man page
auc Man page
auc.mc Man page
budget.gpp Man page
budget.ie Man page
budget.reco Man page
checkm Man page
chop Man page
export Man page
flux Man page
flux.calib Man page
flux.conv Man page
flux.odae Man page
flux-package Man page
fluxx Man page
gflux Man page
gpp Man page
gpp2 Man page
gpp.bulk Man page
inspect Man page
lips Man page
mf.flux Man page
modjust Man page
plot.fluss Man page
plot.flux Man page
plot.fluxes Man page
plot.fluxx Man page
plot.fluxxes Man page
plot.gpp Man page
plot.reco Man page
print.fluss Man page
print.fluxes Man page
print.fluxxes Man page
reco Man page
reco.bulk Man page
round.POSIXct Man page
round.POSIXlt Man page
tbl8 Man page
tt.flux Man page
tt.nee Man page
tt.pre Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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