Files in forcis
Handle the FORCIS Foraminifera Database

MD5
README.md
NAMESPACE
DESCRIPTION
R/sysdata.rda
R/get_available_versions.R R/filter_by_polygon.R R/filter_by_bbox.R R/utils-taxonomy.R R/select_taxonomy.R R/compute_frequencies.R R/get_version_metadata.R R/plot_record_by_season.R R/compute_concentrations.R R/read_sediment_trap_data.R R/get_species_names.R R/compute_abundances.R R/filter_by_month.R R/read_pump_data.R R/read_plankton_nets_data.R R/filter_by_species.R R/download_forcis_db.R R/read_cpr_north_data.R R/forcis-package.R R/geom_basemap.R R/get_ocean_names.R R/select_forcis_columns.R R/utils-zenodo.R R/ggmap_data.R R/convert_to_long_format.R R/read_cpr_south_data.R R/plot_record_by_year.R R/plot_record_by_depth.R R/filter_by_ocean.R R/filter_by_year.R R/utils-filenames.R R/get_required_columns.R R/utils-checks.R R/plot_record_by_month.R R/data_to_sf.R R/utils.R
inst/CITATION
inst/foraminifera.png
inst/hexsticker.R inst/doc/database-versions.Rmd
inst/doc/data-conversion.html
inst/doc/data-conversion.Rmd inst/doc/forcis.Rmd inst/doc/select-and-filter-data.Rmd inst/doc/data-visualization.R inst/doc/select-and-filter-data.R
inst/doc/database-versions.html
inst/doc/forcis.html
inst/doc/sampling-devices.Rmd inst/doc/database-versions.R
inst/doc/sampling-devices.html
inst/doc/sampling-devices.R inst/doc/data-conversion.R
inst/doc/select-and-filter-data.html
inst/doc/forcis.R inst/doc/data-visualization.Rmd
inst/doc/data-visualization.html
inst/extdata/IHO_Indian_ocean_polygon.gpkg
inst/extdata/FORCIS_cpr_north_sample.csv
inst/extdata/FORCIS_net_sample.csv
build/vignette.rds
build/partial.rdb
tests/testthat.R tests/testthat/test-filter_by_month.R tests/testthat/test-geom_basemap.R tests/testthat/test-read_cpr_north_data.R tests/testthat/test-filter_by_year.R tests/testthat/test-compute_frequencies.R tests/testthat/test-download_forcis_db.R tests/testthat/test-add_data_type.R tests/testthat/test-ggmap_data.R tests/testthat/test-filter_by_polygon.R tests/testthat/test-plot_record_by_year.R tests/testthat/test-plot_record_by_month.R tests/testthat/test-filter_by_species.R tests/testthat/test-read_pump_data.R tests/testthat/test-read_plankton_nets_data.R tests/testthat/test-convert_to_long_format.R tests/testthat/test-get_data_type.R tests/testthat/test-select_forcis_columns.R tests/testthat/test-read_sediment_trap_data.R tests/testthat/test-version.R tests/testthat/test-get_ocean_names.R tests/testthat/test-filter_by_ocean.R tests/testthat/test-read_cpr_south_data.R tests/testthat/test-filter_by_bbox.R tests/testthat/test-get_species_names.R tests/testthat/test-compute_abundances.R tests/testthat/test-select_taxonomy.R tests/testthat/test-checks.R tests/testthat/test-plot_record_by_season.R tests/testthat/setup.R tests/testthat/test-data_to_sf.R tests/testthat/test-compute_concentrations.R tests/testthat/test-variables.R tests/testthat/test-plot_record_by_depth.R tests/testthat/test-download_file.R
tests/testthat/_snaps/plot_record_by_season/plot-record-by-season.svg
tests/testthat/_snaps/ggmap_data/map-data.svg
tests/testthat/_snaps/geom_basemap/plot-with-basemap.svg
tests/testthat/_snaps/plot_record_by_depth/plot-record-by-depth.svg
tests/testthat/_snaps/plot_record_by_year/plot-trap-record-by-year.svg
tests/testthat/_snaps/plot_record_by_year/plot-net-record-by-year.svg
tests/testthat/_snaps/plot_record_by_month/plot-record-by-month.svg
tests/testthat/mockdata/all-records/zenodo.org/api/records-f5a5db.R vignettes/database-versions.Rmd vignettes/data-conversion.Rmd vignettes/forcis.Rmd vignettes/select-and-filter-data.Rmd
vignettes/devices.png
vignettes/sampling-devices.Rmd vignettes/data-visualization.Rmd man/plot_record_by_year.Rd man/filter_by_species.Rd man/filter_by_year.Rd man/filter_by_polygon.Rd man/download_forcis_db.Rd man/plot_record_by_season.Rd man/read_data.Rd man/computations.Rd man/get_species_names.Rd man/filter_by_bbox.Rd man/select_taxonomy.Rd man/data_to_sf.Rd man/select_forcis_columns.Rd man/convert_to_long_format.Rd man/forcis-package.Rd man/ggmap_data.Rd man/get_available_versions.Rd man/get_required_columns.Rd man/filter_by_month.Rd man/geom_basemap.Rd man/filter_by_ocean.Rd man/get_version_metadata.Rd man/plot_record_by_depth.Rd man/plot_record_by_month.Rd man/get_ocean_names.Rd
man/figures/visualization.png
man/figures/logo.png
man/figures/workflow.png
forcis documentation built on June 8, 2025, 10:37 a.m.