forensim: Statistical tools for the interpretation of forensic DNA mixtures

Statistical methods and simulation tools for the interpretation of forensic DNA mixtures

AuthorHinda Haned <h.haned@nfi.minvenj.nl>
Date of publication2013-09-15 18:24:52
MaintainerHinda Haned <h.haned@nfi.minvenj.nl>
LicenseGPL (>= 2)
Version4.3

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Man pages

A2.simu: A Tcl/Tk graphical user interface for simple DNA mixtures...

A3.simu: A Tcl/Tk graphical user interface for simple DNA mixtures...

A4.simu: A Tcl/Tk graphical user interface for simple DNA mixtures...

accessors: Accessors for forensim objects

as.simugeno: simugeno constructor

as.simumix: simumix constructor

as.tabfreq: tabfreq constructor

changepop: Function to change population-related information in forensim...

Cmn: The number of all possible combinations of m elements among n...

comb: Generate all possible combinations of m elements among n with...

dataL: Generic formula of the likelihood of the observed alleles in...

findfreq: Finds the allele frequencies of a mixture from a tabfreq...

findmax: Function to find the maximum of a vector and its position

forensim.package: The forensim package

Hbsimu: A Tcl/Tk simulator of the heterozygous balance

lik: Likelihood of the observed alleles at different loci in a DNA...

likestim: Maximum likelihood estimation of the number of contributors...

likestim.loc: Maximum likelihood estimation per locus of the number of...

likEvid: Likelihood of DNA evidence conditioned on a given hypothesis

lik.loc: Likelihood per locus of the observed alleles in a DNA mixture...

LR: Likelihood ratio for DNA evidence interpretation (2): a...

LRmixTK: GUI for the LR function

mastermix: A Tcl/Tk graphical user interface for simple DNA mixtures...

mincontri: Minimum number of contributors required to explain a forensic...

N2error: Calculates exact error for maximum allele count for two...

N2Exact: Calculates exact allele distribution for 2 contributors

naomitab: Handling of missing values in a data frame

nball: Number of alleles in a mixture

ngm: Allele frequencies for the new generation markers NGM, for...

PE: The random man exclusion probability

PV: Predictive value of the maximum likelihood estimator of the...

sgmNorway: Allele frequencies for the new generation markers sgm, for...

simMixSNP: Simulates SNP mixtures

simPCR2: Polymorphism chain reaction simulation model

simPCR2TK: A Tcl/Tk graphical interface for the polymorphism chain...

simufreqD: Function to simulate allele frequencies for independent loci...

simugeno: forensim class for simluated genotypes

simumix: forensim class for DNA mixtures

simupopD: Simulate multi-population allele frequencies for independent...

strusa: Allele frequencies for 15 autosomal short tandem repeats core...

strveneto: Population study of three miniSTR loci in Veneto (Italy)

tabfreq: forensim class for population allele frequencies

Tu: Allele frequencies of 15 autosomal short tandem repeats loci...

virClasses: Virtual classes for forensim

wrapdataL: ML estimate of number of contributors for SNPs

Files in this package

forensim
forensim/inst
forensim/inst/files
forensim/inst/files/exprofile.txt
forensim/inst/files/examplemixture.csv
forensim/src
forensim/src/auxilary.c
forensim/src/recursFinal.c
forensim/NAMESPACE
forensim/data
forensim/data/strusa.rdata
forensim/data/strveneto.rdata
forensim/data/Tu.rdata
forensim/data/ngm.rdata
forensim/data/sgmNorway.rdata
forensim/R
forensim/R/AuxFunc.R forensim/R/simMixSNP.R forensim/R/mincontri.R forensim/R/accessors.R forensim/R/N2error.R forensim/R/A3.simu.R forensim/R/simPCR2TK.R forensim/R/mastermix.R forensim/R/simufreqD.R forensim/R/changepop.R forensim/R/LR.R forensim/R/likestim.R forensim/R/PE.R forensim/R/N2Exact.R forensim/R/A2.simu.R forensim/R/simupopD.R forensim/R/PV.R forensim/R/LRmixTK.R forensim/R/classes_constructors.R forensim/R/simPCR2.R forensim/R/likelihood.R forensim/R/classes_definitions.R forensim/R/Hbsimu.R forensim/R/A4.simu.R forensim/R/wrapdataL.R
forensim/MD5
forensim/DESCRIPTION
forensim/man
forensim/man/Hbsimu.Rd forensim/man/PV.Rd forensim/man/simPCR2TK.Rd forensim/man/naomitab.Rd forensim/man/A3.simu.Rd forensim/man/simMixSNP.Rd forensim/man/changepop.Rd forensim/man/Tu.Rd forensim/man/mincontri.Rd forensim/man/wrapdataL.Rd forensim/man/lik.loc.Rd forensim/man/LR.Rd forensim/man/comb.Rd forensim/man/mastermix.Rd forensim/man/findmax.Rd forensim/man/sgmNorway.Rd forensim/man/LRmixTK.Rd forensim/man/lik.Rd forensim/man/forensim.package.Rd forensim/man/simupopD.Rd forensim/man/N2error.Rd forensim/man/as.simumix.Rd forensim/man/likestim.loc.Rd forensim/man/likestim.Rd forensim/man/virClasses.Rd forensim/man/nball.Rd forensim/man/PE.Rd forensim/man/simugeno.Rd forensim/man/strveneto.Rd forensim/man/simPCR2.Rd forensim/man/A2.simu.Rd forensim/man/dataL.Rd forensim/man/as.tabfreq.Rd forensim/man/likEvid.Rd forensim/man/N2Exact.Rd forensim/man/simufreqD.Rd forensim/man/strusa.Rd forensim/man/tabfreq.Rd forensim/man/as.simugeno.Rd forensim/man/findfreq.Rd forensim/man/ngm.Rd forensim/man/simumix.Rd forensim/man/A4.simu.Rd forensim/man/accessors.Rd forensim/man/Cmn.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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