forensim: Statistical tools for the interpretation of forensic DNA mixtures

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Statistical methods and simulation tools for the interpretation of forensic DNA mixtures

Author
Hinda Haned <h.haned@nfi.minvenj.nl>
Date of publication
2013-09-15 18:24:52
Maintainer
Hinda Haned <h.haned@nfi.minvenj.nl>
License
GPL (>= 2)
Version
4.3

View on CRAN

Man pages

A2.simu
A Tcl/Tk graphical user interface for simple DNA mixtures...
A3.simu
A Tcl/Tk graphical user interface for simple DNA mixtures...
A4.simu
A Tcl/Tk graphical user interface for simple DNA mixtures...
accessors
Accessors for forensim objects
as.simugeno
simugeno constructor
as.simumix
simumix constructor
as.tabfreq
tabfreq constructor
changepop
Function to change population-related information in forensim...
Cmn
The number of all possible combinations of m elements among n...
comb
Generate all possible combinations of m elements among n with...
dataL
Generic formula of the likelihood of the observed alleles in...
findfreq
Finds the allele frequencies of a mixture from a tabfreq...
findmax
Function to find the maximum of a vector and its position
forensim.package
The forensim package
Hbsimu
A Tcl/Tk simulator of the heterozygous balance
lik
Likelihood of the observed alleles at different loci in a DNA...
likestim
Maximum likelihood estimation of the number of contributors...
likestim.loc
Maximum likelihood estimation per locus of the number of...
likEvid
Likelihood of DNA evidence conditioned on a given hypothesis
lik.loc
Likelihood per locus of the observed alleles in a DNA mixture...
LR
Likelihood ratio for DNA evidence interpretation (2): a...
LRmixTK
GUI for the LR function
mastermix
A Tcl/Tk graphical user interface for simple DNA mixtures...
mincontri
Minimum number of contributors required to explain a forensic...
N2error
Calculates exact error for maximum allele count for two...
N2Exact
Calculates exact allele distribution for 2 contributors
naomitab
Handling of missing values in a data frame
nball
Number of alleles in a mixture
ngm
Allele frequencies for the new generation markers NGM, for...
PE
The random man exclusion probability
PV
Predictive value of the maximum likelihood estimator of the...
sgmNorway
Allele frequencies for the new generation markers sgm, for...
simMixSNP
Simulates SNP mixtures
simPCR2
Polymorphism chain reaction simulation model
simPCR2TK
A Tcl/Tk graphical interface for the polymorphism chain...
simufreqD
Function to simulate allele frequencies for independent loci...
simugeno
forensim class for simluated genotypes
simumix
forensim class for DNA mixtures
simupopD
Simulate multi-population allele frequencies for independent...
strusa
Allele frequencies for 15 autosomal short tandem repeats core...
strveneto
Population study of three miniSTR loci in Veneto (Italy)
tabfreq
forensim class for population allele frequencies
Tu
Allele frequencies of 15 autosomal short tandem repeats loci...
virClasses
Virtual classes for forensim
wrapdataL
ML estimate of number of contributors for SNPs

Files in this package

forensim
forensim/inst
forensim/inst/files
forensim/inst/files/exprofile.txt
forensim/inst/files/examplemixture.csv
forensim/src
forensim/src/auxilary.c
forensim/src/recursFinal.c
forensim/NAMESPACE
forensim/data
forensim/data/strusa.rdata
forensim/data/strveneto.rdata
forensim/data/Tu.rdata
forensim/data/ngm.rdata
forensim/data/sgmNorway.rdata
forensim/R
forensim/R/AuxFunc.R
forensim/R/simMixSNP.R
forensim/R/mincontri.R
forensim/R/accessors.R
forensim/R/N2error.R
forensim/R/A3.simu.R
forensim/R/simPCR2TK.R
forensim/R/mastermix.R
forensim/R/simufreqD.R
forensim/R/changepop.R
forensim/R/LR.R
forensim/R/likestim.R
forensim/R/PE.R
forensim/R/N2Exact.R
forensim/R/A2.simu.R
forensim/R/simupopD.R
forensim/R/PV.R
forensim/R/LRmixTK.R
forensim/R/classes_constructors.R
forensim/R/simPCR2.R
forensim/R/likelihood.R
forensim/R/classes_definitions.R
forensim/R/Hbsimu.R
forensim/R/A4.simu.R
forensim/R/wrapdataL.R
forensim/MD5
forensim/DESCRIPTION
forensim/man
forensim/man/Hbsimu.Rd
forensim/man/PV.Rd
forensim/man/simPCR2TK.Rd
forensim/man/naomitab.Rd
forensim/man/A3.simu.Rd
forensim/man/simMixSNP.Rd
forensim/man/changepop.Rd
forensim/man/Tu.Rd
forensim/man/mincontri.Rd
forensim/man/wrapdataL.Rd
forensim/man/lik.loc.Rd
forensim/man/LR.Rd
forensim/man/comb.Rd
forensim/man/mastermix.Rd
forensim/man/findmax.Rd
forensim/man/sgmNorway.Rd
forensim/man/LRmixTK.Rd
forensim/man/lik.Rd
forensim/man/forensim.package.Rd
forensim/man/simupopD.Rd
forensim/man/N2error.Rd
forensim/man/as.simumix.Rd
forensim/man/likestim.loc.Rd
forensim/man/likestim.Rd
forensim/man/virClasses.Rd
forensim/man/nball.Rd
forensim/man/PE.Rd
forensim/man/simugeno.Rd
forensim/man/strveneto.Rd
forensim/man/simPCR2.Rd
forensim/man/A2.simu.Rd
forensim/man/dataL.Rd
forensim/man/as.tabfreq.Rd
forensim/man/likEvid.Rd
forensim/man/N2Exact.Rd
forensim/man/simufreqD.Rd
forensim/man/strusa.Rd
forensim/man/tabfreq.Rd
forensim/man/as.simugeno.Rd
forensim/man/findfreq.Rd
forensim/man/ngm.Rd
forensim/man/simumix.Rd
forensim/man/A4.simu.Rd
forensim/man/accessors.Rd
forensim/man/Cmn.Rd