Description Slots Methods Author(s) See Also Examples
View source: R/classes_constructors.R
The S4 simumix
class is used to store DNA mixtures of individual genotypes
along with informations about the individuals poulations and the loci used to simulate the genotypes.
ncontri
: integer vector giving the number of contributors to the DNA mixture. If there are
several populations, ncontri
gives the number of contributors per population
mix.prof
:matrix giving the contributors genotypes (in rows) for each locus (in columns). The genotype of a homozygous individual carrying the allele "12" is coded "12/12". A heterozygous individual carrying alleles "12" and "13" is coded "12/13" or "13/12".
mix.all
:list giving the alleles present in the mixture for each locus
which.loc
:character vector giving the locus names
popinfo
:factor giving the population of each contributor
signature(x = "simumix")
: gives the names of the attributes of a simumix object
signature(object = "simumix")
: shows a simumix object
signature(object = "simumix")
: prints a simumix object
Hinda Haned h.haned@nfi.minvenj.nl
simugeno
, as.simumix
, is.simumix
, simugeno
and tabfreq
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