frailtySurv: General Semiparametric Shared Frailty Model
Version 1.3.2

Simulates and fits semiparametric shared frailty models under a wide range of frailty distributions using a consistent and asymptotically-normal estimator. Currently supports: gamma, power variance function, log-normal, and inverse Gaussian frailty models.

Browse man pages Browse package API and functions Browse package files

AuthorJohn V. Monaco [aut, cre], Malka Gorfine [aut], Li Hsu [aut]
Date of publication2017-02-02 17:34:23
MaintainerJohn V. Monaco <vincent@vmonaco.com>
LicenseLGPL-2
Version1.3.2
URL https://github.com/vmonaco/frailtySurv/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("frailtySurv")

Man pages

drs: Diabetic Retinopathy Study (DRS)
fitfrail: Fit a shared frailty model
fitfrail.control: Control parameters for fitfrail
frailtySurv: General semiparametric shared frailty model
genfrail: Generate survival data
genfrail.control: Control parameters for genfrail
hdfail: Hard drive failure dataset
plot.fitfrail: Plot method for 'fitfrail' objects
plot.simfrail: Plot method for 'simfrail' objects
simcoxph: Simulate survival data and fit models
simfrail: Simulate survival data and fit models
summary.fitfrail: Summary of the survival curve
vcov.fitfrail: Compute variance/covariance matrix for fitfrail model

Functions

G_rl Source code
M_hat Source code
Omega Source code
Q_beta Source code
Q_theta Source code
Upsilon Source code
Ycal Source code
bh Source code
dH_dbeta Source code
dH_dtheta Source code
deriv_deriv_dgamma_r Source code
deriv_deriv_dinvgauss_c Source code
deriv_deriv_dinvgauss_r Source code
deriv_deriv_dinvgauss_r_numeric Source code
deriv_deriv_dlognormal_c Source code
deriv_deriv_dlognormal_r Source code
deriv_deriv_dlognormal_r_numeric Source code
deriv_deriv_lt_dgamma_c Source code
deriv_deriv_lt_dgamma_r Source code
deriv_deriv_lt_dgamma_r_numeric Source code
deriv_deriv_lt_dpvf_c Source code
deriv_deriv_lt_dpvf_coef Source code
deriv_deriv_lt_dpvf_coef_r Source code
deriv_deriv_lt_dpvf_coef_r_numeric Source code
deriv_deriv_lt_dpvf_r Source code
deriv_deriv_lt_dpvf_r_numeric Source code
deriv_dgamma_c Source code
deriv_dgamma_r Source code
deriv_dgamma_r_numeric Source code
deriv_dinvgauss_c Source code
deriv_dinvgauss_r Source code
deriv_dinvgauss_r_numeric Source code
deriv_dlognormal_c Source code
deriv_dlognormal_r Source code
deriv_dlognormal_r_numeric Source code
deriv_lt_dgamma_c Source code
deriv_lt_dgamma_r Source code
deriv_lt_dgamma_r_numeric Source code
deriv_lt_dpvf_c Source code
deriv_lt_dpvf_coef Source code
deriv_lt_dpvf_coef_r Source code
deriv_lt_dpvf_coef_r_numeric Source code
deriv_lt_dpvf_r Source code
deriv_lt_dpvf_r_numeric Source code
dgamma_c Source code
dgamma_r Source code
dinvgauss_c Source code
dinvgauss_r Source code
dlognormal_c Source code
dlognormal_r Source code
dlognormalmix_r Source code
dposstab_c Source code
dposstab_r Source code
dpvf_c Source code
dpvf_r Source code
drs Man page
dtzeta Source code
eta Source code
etpois Source code
etzeta Source code
fitfrail Man page Source code
fitfrail.control Man page Source code
fitfrail.fit Source code
frailtySurv Man page
frailtySurv-package Man page
genfrail Man page Source code
genfrail.control Man page Source code
hdfail Man page
jacobian_beta_beta Source code
jacobian_beta_theta Source code
jacobian_theta_beta Source code
jacobian_theta_theta Source code
loglikelihood Source code
lt_dgamma_c Source code
lt_dgamma_moment_r Source code
lt_dgamma_r Source code
lt_dinvgauss_c Source code
lt_dlognormal_c Source code
lt_dposstab_c Source code
lt_dposstab_r Source code
lt_dpvf_c Source code
lt_dpvf_coef Source code
lt_dpvf_coef_r Source code
lt_dpvf_moment_r Source code
lt_dpvf_r Source code
lt_numeric Source code
onAttach Source code
onLoad Source code
onUnload Source code
p_hat Source code
phi_c Source code
phi_k Source code
phi_laplace Source code
phi_numerical Source code
phi_prime_c Source code
phi_prime_k Source code
phi_prime_prime_c Source code
phi_prime_prime_k Source code
pi_r Source code
plapply Source code
plot.fitfrail Man page Source code
plot.fitfrail.cumhaz Source code
plot.fitfrail.trace Source code
plot.simfrail Man page Source code
plot.simfrail.cumhaz Source code
plot.simfrail.residuals Source code
print.fitfrail Source code
print.genfrail Source code
print.simfrail Source code
print.summary.genfrail Source code
print.summary.simfrail Source code
rgamma_r Source code
rinvgauss_r Source code
rlaptrans Source code
rlognormal_r Source code
rlognormalmix_r Source code
rposstab_r Source code
rpvf_r Source code
rtpois Source code
rtzeta Source code
sim.enum.fit Source code
sim.enum.gen Source code
simcoxph Man page Source code
simfrail Man page Source code
simfrail.enum Source code
simfrailtyPenal Source code
summary.fitfrail Man page Source code
summary.genfrail Source code
summary.simfrail Source code
tau.empirical Source code
tau.numerical Source code
theta.given.tau Source code
u_star Source code
vcov.fitfrail Man page Source code
vgamma_r Source code
vinvgauss_r Source code
vlognormal_r Source code
vlognormalmix Source code
vpvf_r Source code
xi_beta Source code
xi_theta Source code
zeta Source code

Files

src
src/hcubature.c
src/Makevars
src/estimators.cpp
src/converged.h
src/vwrapper.h
src/distributions.cpp
src/RcppExports.cpp
src/cubature.h
src/distributions.h
NAMESPACE
NEWS.md
data
data/drs.rda
data/hdfail.rda
R
R/summary.genfrail.R
R/print.fitfrail.R
R/plapply.R
R/simfrail.R
R/print.genfrail.R
R/genfrail.control.R
R/distributions.R
R/genfrail.R
R/fitfrail.R
R/print.simfrail.R
R/RcppExports.R
R/rlaptrans.R
R/summary.fitfrail.R
R/print.summary.simfrail.R
R/print.summary.genfrail.R
R/plot.simfrail.R
R/vcov.fitfrail.R
R/plot.fitfrail.R
R/misc.R
R/frailtySurv.R
R/fitfrail.control.R
R/summary.simfrail.R
R/fitfrail.fit.R
README.md
MD5
DESCRIPTION
man
man/plot.fitfrail.Rd
man/hdfail.Rd
man/plot.simfrail.Rd
man/fitfrail.control.Rd
man/frailtySurv.Rd
man/summary.fitfrail.Rd
man/simcoxph.Rd
man/fitfrail.Rd
man/simfrail.Rd
man/vcov.fitfrail.Rd
man/genfrail.Rd
man/genfrail.control.Rd
man/drs.Rd
frailtySurv documentation built on May 19, 2017, 10:05 p.m.