surfaceras.to.ras: Translate surface RAS coordinates, as used in surface...

In freesurferformats: Read and Write 'FreeSurfer' Neuroimaging File Formats

Description

Translate surface RAS coordinates, as used in surface vertices and surface labels, to volume RAS.

Usage

surfaceras.to.ras(
  header_cras,
  sras_coords,
  first_voxel_RAS = c(1, 1, 1),
  invert_transform = FALSE
)

Arguments

header_cras	an MGH header instance from which to extract the cras (center RAS), or the cras vector, i.e., a numerical vector of length 3
sras_coords	nx3 numerical vector, the input surface RAS coordinates. Could be the vertex coordinates of an 'fs.surface' instance, or the RAS coords from a surface label. Use the orig surfaces.
first_voxel_RAS	the RAS of the first voxel, see mghheader.centervoxelRAS.from.firstvoxelRAS for details. Ignored if 'header_cras' is a vector.
invert_transform	logical, whether to invert the transform. Do not use this, call link{ras.to.surfaceras} instead.

Value

the RAS coords for the input sras_coords

Note

The RAS can be computed from Surface RAS by adding the center RAS coordinates, i.e., it is nothing but a translation.

freesurferformats documentation built on Feb. 11, 2022, 5:06 p.m.