API for freesurferformats
Read and Write 'FreeSurfer' Neuroimaging File Formats

Global functions
adjust.face.indices.to Man page Source code
annot.max.region.idx Man page
annot.unique Man page
assert.surface Man page
bvsmp Man page Source code
cdata Man page Source code
check.dtype.for.data Man page
check.verts.faces Source code
check_data_and_settings_consistency Man page Source code
closest.vert.to.point Man page Source code
colortable.from.annot Man page
coord.to.key Man page Source code
delete_all_opt_data Man page Source code
doapply.transform.mtx Man page Source code
download_opt_data Man page Source code
euclidian.dist Man page Source code
faces.quad.to.tris Man page Source code
faces.tris.to.quad Man page Source code
fileopen.gz.or.not Man page Source code
filepath.ends.with Man page Source code
fixed.format.lines Source code
fixed.vec.format.int Man page Source code
flip2D Man page Source code
flip3D Man page Source code
fread3 Man page Source code
fs.get.morph.file.ext.for.format Man page Source code
fs.get.morph.file.format.from.filename Man page Source code
fs.patch Man page Source code
fs.surface.to.tmesh3d Man page Source code
fwrite3 Man page Source code
get.dti.trk.endianness Man page Source code
get.slice.orientation Man page Source code
get_opt_data_filepath Man page Source code
gifti_writer Man page Source code
gifti_xml Man page Source code
gifti_xml_add_global_metadata Man page Source code
gifti_xml_write Man page Source code
giftixml_add_labeltable_from_annot Man page Source code
giftixml_add_labeltable_posneg Man page Source code
guess.filename.is.gzipped Man page Source code
has_pandoc Man page Source code
int.to.col.brainvoyager Man page Source code
is.bvsmp Man page Source code
is.fs.annot Man page
is.fs.label Man page Source code
is.fs.surface Man page Source code
is.fs.volume Man page Source code
is.mghheader Man page Source code
linesplit.fixed Man page Source code
list_opt_data Man page Source code
mgh.is.conformed Man page Source code
mghheader Man page Source code
mghheader.centervoxelRAS.from.firstvoxelRAS Man page Source code
mghheader.crs.orientation Man page Source code
mghheader.is.conformed Man page Source code
mghheader.is.ras.valid Man page Source code
mghheader.primary.slice.direction Man page Source code
mghheader.ras2vox Man page Source code
mghheader.ras2vox.tkreg Man page Source code
mghheader.scanner2tkreg Man page Source code
mghheader.tkreg2scanner Man page Source code
mghheader.update.from.vox2ras Man page Source code
mghheader.vox2ras Man page Source code
mghheader.vox2ras.tkreg Man page Source code
mghheader.vox2vox Man page Source code
mni152reg Man page Source code
mri_dtype_numbytes Man page
ni1header.for.data Man page Source code
ni1header.template Man page Source code
ni2header.for.data Man page Source code
ni2header.template Man page Source code
nifti.datadim.from.dimfield Man page Source code
nifti.datadim.to.dimfield Man page Source code
nifti.dtype.info Man page Source code
nifti.field.check.length Man page Source code
nifti.field.check.nchar.max Man page Source code
nifti.file.uses.fshack Man page Source code
nifti.file.version Man page Source code
nifti.header.check Man page Source code
nifti.space.info Man page Source code
nifti.time.info Man page Source code
nifti.transform.type.name Man page Source code
parse.stl.ascii.face Man page Source code
parse.transform.matrix.lines Man page Source code
ply.header.lines Man page Source code
polygon.soup.to.indexed.mesh Man page Source code
print.fs.annot Man page
print.fs.label Man page Source code
print.fs.patch Man page Source code
print.fs.surface Man page Source code
print.fs.volume Man page Source code
ras.to.surfaceras Man page Source code
ras.to.talairachras Man page Source code
read.dti.tck Man page Source code
read.dti.trk Man page Source code
read.dti.tsf Man page Source code
read.element.counts.ply.header Man page Source code
read.fixed.char.binary Man page Source code
read.fs.annot Man page Source code
read.fs.annot.gii Man page
read.fs.colortable Man page
read.fs.curv Man page Source code
read.fs.gca Man page
read.fs.label Man page Source code
read.fs.label.gii Man page Source code
read.fs.label.native Man page Source code
read.fs.mgh Man page Source code
read.fs.morph Man page Source code
read.fs.morph.asc Man page Source code
read.fs.morph.bvsmp Man page Source code
read.fs.morph.cifti Man page Source code
read.fs.morph.gii Man page Source code
read.fs.morph.ni1 Man page Source code
read.fs.morph.ni2 Man page Source code
read.fs.morph.nii Man page Source code
read.fs.morph.txt Man page Source code
read.fs.patch Man page Source code
read.fs.patch.asc Man page Source code
read.fs.surface Man page Source code
read.fs.surface.asc Man page Source code
read.fs.surface.bvsrf Man page Source code
read.fs.surface.byu Man page Source code
read.fs.surface.geo Man page Source code
read.fs.surface.gii Man page Source code
read.fs.surface.ico Man page Source code
read.fs.surface.mz3 Man page Source code
read.fs.surface.obj Man page Source code
read.fs.surface.off Man page Source code
read.fs.surface.ply Man page Source code
read.fs.surface.stl Man page Source code
read.fs.surface.stl.ascii Man page Source code
read.fs.surface.stl.bin Man page Source code
read.fs.surface.vtk Man page Source code
read.fs.transform Man page Source code
read.fs.transform.dat Man page Source code
read.fs.transform.lta Man page Source code
read.fs.transform.xfm Man page Source code
read.fs.volume Man page Source code
read.fs.volume.nii Man page Source code
read.fs.weight Man page Source code
read.fs.weight.asc Man page Source code
read.mesh.brainvoyager Man page Source code
read.nifti1.data Man page Source code
read.nifti1.header Man page Source code
read.nifti1.header.internal Man page Source code
read.nifti2.data Man page Source code
read.nifti2.header Man page Source code
read.nifti2.header.internal Man page Source code
read.smp.brainvoyager Man page Source code
read.smp.brainvoyager.v1or2 Man page Source code
read.smp.brainvoyager.v3 Man page Source code
read.smp.brainvoyager.v4or5 Man page Source code
read_nisurface Man page Source code
read_nisurfacefile Man page Source code
read_nisurfacefile.default Source code
read_nisurfacefile.fsascii Man page Source code
read_nisurfacefile.fsnative Man page Source code
read_nisurfacefile.gifti Man page Source code
readable.files Man page Source code
readcolortable Man page
readcolortable_oldformat Man page
rotate2D Man page Source code
rotate3D Man page Source code
rotate90 Man page Source code
scann Man page Source code
sm0to1 Man page Source code
sm1to0 Man page Source code
stl.format.file.is.ascii Man page Source code
surfaceras.to.ras Man page Source code
surfaceras.to.talairach Man page Source code
talairachras.to.ras Man page Source code
translate.mri.dtype Man page Source code
vertex.euclid.dist Man page Source code
vertexdists.to.point Man page Source code
write.fs.annot Man page Source code
write.fs.annot.gii Man page Source code
write.fs.colortable Man page Source code
write.fs.curv Man page Source code
write.fs.label Man page Source code
write.fs.label.gii Man page Source code
write.fs.mgh Man page Source code
write.fs.morph Man page Source code
write.fs.morph.asc Man page Source code
write.fs.morph.gii Man page Source code
write.fs.morph.ni1 Man page Source code
write.fs.morph.ni2 Man page Source code
write.fs.morph.smp Man page Source code
write.fs.morph.txt Man page Source code
write.fs.patch Man page Source code
write.fs.surface Man page Source code
write.fs.surface.asc Man page Source code
write.fs.surface.bvsrf Man page Source code
write.fs.surface.byu Man page Source code
write.fs.surface.gii Man page Source code
write.fs.surface.mz3 Man page Source code
write.fs.surface.obj Man page Source code
write.fs.surface.off Man page Source code
write.fs.surface.off.ply2 Man page Source code
write.fs.surface.ply Man page Source code
write.fs.surface.ply2 Man page Source code
write.fs.surface.vtk Man page Source code
write.fs.weight Man page Source code
write.fs.weight.asc Man page Source code
write.nifti1 Man page Source code
write.nifti2 Man page Source code
write.smp.brainvoyager Man page Source code
write.smp.brainvoyager.v2 Man page Source code
write.smp.brainvoyager.v3or4or5 Man page Source code
xml_node_gifti_MD Man page Source code
xml_node_gifti_coordtransform Man page Source code
xml_node_gifti_label Man page Source code
xml_node_gifti_label_table Man page Source code
xml_node_gifti_label_table_from_annot Man page Source code
freesurferformats documentation built on Feb. 11, 2022, 5:06 p.m.