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g2f: Find and Fill Gaps in Metabolic Networks
For a given metabolic network, this package finds the gaps (metabolites not produced or not consumed in any other reaction), and fills it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database <http://www.genome.jp/kegg/> is available.
Getting started
Browse package contents
Package details |
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| Author | Daniel Osorio [aut, cre], Kelly Botero [aut], Janneth Gonzalez [aut, ths], Andres Pinzon [aut] |
| Maintainer | Daniel Osorio <dcosorioh@unal.edu.co> |
| License | GPL-2 |
| Version | 0.2 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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