g2f: Find and Fill Gaps in Metabolic Networks
Version 0.2

For a given metabolic network, this package finds the gaps (metabolites not produced or not consumed in any other reaction), and fills it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database is available.

Getting started

Package details

AuthorDaniel Osorio [aut, cre], Kelly Botero [aut], Janneth Gonzalez [aut, ths], Andres Pinzon [aut]
Date of publication2018-03-18 18:16:41 UTC
MaintainerDaniel Osorio <[email protected]>
Package repositoryView on CRAN
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g2f documentation built on March 19, 2018, 1:05 a.m.