g2f: Find and Fill Gaps in Metabolic Networks

For a given metabolic network, this package finds the gaps (metabolites not produced or not consumed in any other reaction), and fills it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database <http://www.genome.jp/kegg/> is available.

Install the latest version of this package by entering the following in R:
install.packages("g2f")
AuthorKelly Botero[aut,cre], Daniel Osorio[aut,cre], Janneth Gonzalez[aut], Andres Pinzon[aut].
Date of publication2016-10-08 08:48:09
MaintainerDaniel Osorio <dcosorioh@unal.edu.co>
LicenseGPL-2
Version0.1

View on CRAN

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