g2f: Find and Fill Gaps in Metabolic Networks
Version 0.1

For a given metabolic network, this package finds the gaps (metabolites not produced or not consumed in any other reaction), and fills it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database is available.

Getting started

Package details

AuthorKelly Botero[aut,cre], Daniel Osorio[aut,cre], Janneth Gonzalez[aut], Andres Pinzon[aut].
Date of publication2016-10-08 08:48:09
MaintainerDaniel Osorio <[email protected]>
LicenseGPL-2
Version0.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("g2f")

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g2f documentation built on May 29, 2017, 5:43 p.m.