Man pages for g3viz
Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram
| g3Lollipop | Render g3lollipop diagram for the given mutation data |
| g3Lollipop.options | G3Lollipop plot options |
| g3Lollipop-shiny | Shiny bindings for g3Lollipop |
| g3Lollipop.theme | G3Lollipop chart options of built-in themes. |
| getMutationsFromCbioportal | Query cancer genomic mutation data from cBioPortal |
| guessMAFColumnName | Guess column name for MAF file |
| hgnc2pfam | Map from Hugo symbol to Pfam domains |
| hgnc2pfam.df | Mapping table between gene.symbol, uniprot.id, and pfam |
| hgnc2uniprot | Mapping from Hugo symbol to UniProt IDs |
| mapMutationTypeToMutationClass | Map from mutation type (aka, variant classification) to... |
| mutation.table.df | Default mapping table between mutation type (aka, variant... |
| parseProteinChange | Extract _amino_acid_position_ from _Protein_Change_ |
| readMAF | Read MAF file |
| uniprot2pfam | From UniProt ID to Pfam-A domain composition |
