hgnc2pfam.df: Mapping table between gene.symbol, uniprot.id, and pfam

In g3viz: Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram

Mapping table between gene.symbol, uniprot.id, and pfam

Description

A dataset containing the mapping table between Hugo symbol, UniProt ID, and Pfam ACC.

Usage

hgnc2pfam.df

Format

A data frame with columns:

symbol

Gene symbol

uniprot

UniProt ID

length

protein length

start

starting position of Pfam domain

end

ending position of Pfam domain

hmm.acc

Pfam accession number

hmm.name

Pfam name

type

Pfam type, i.e., domain/family/motif/repeat/disordered/coiled-coil

Source

Pfam (v31.0) and UniProt

Examples

hgnc2pfam.df

g3viz documentation built on Aug. 19, 2022, 5:07 p.m.